Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15618 and 15619 are separated by 322 nucleotides15619 and 15620 are separated by 256 nucleotides15620 and 15621 are separated by 743 nucleotides15621 and 15622 are separated by 303 nucleotides mRNA_7250: 15618 - BLAST ClpP/crotonase [Saitoella complicata NRRL Y-17804], at 1,218,970 to 1,220,341 15618 mRNA_7251: 15619 - Hypothetical Protein, at 1,220,664 to 1,222,024 15619 mRNA_7252: 15620 - Hypothetical Protein, at 1,222,281 to 1,223,804 15620 mRNA_7253: 15621 - KOG2497 Predicted methyltransferase, at 1,224,548 to 1,225,738 15621 mRNA_7254: 15622 - Hypothetical Protein, at 1,226,042 to 1,227,561 15622
Group Condition mRNA_7250 mRNA_7251 mRNA_7252 mRNA_7253 mRNA_7254
15618 15619 15620 15621 15622
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.4 -0.5 -0.6 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 +0.0 -1.5 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.2 -0.2 -0.3 -0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 -0.0 -0.2 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 -0.1 -0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 +0.3 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 +0.4 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 +0.6 -0.1 -0.4
auxotrophy Dropout Complete -0.1 -0.2 +0.7 -0.5 +0.2
growth on ricinoleic acid YNB Glucose -0.1 -0.0 +0.3 +0.0 -0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.0 +0.4 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.0 -0.3 +0.3 +0.1
growth on oleic acid YNB Glucose -0.3 -0.0 +0.3 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 +0.3 +0.1 -0.2
auxotrophy YNB Glucose -0.0 -0.2 +0.3 -0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 +0.3 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.3 +0.1 -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 +0.6 +0.3 +0.1
growth on ypd YPD +0.3 +0.8 -0.3 -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 +0.5 +0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 +0.5 +0.1 +0.2
remove
mRNA_7250
plot
remove
mRNA_7251
plot
remove
mRNA_7252
remove
mRNA_7253
plot
remove
mRNA_7254
plot