Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15618 and 15619 are separated by 322 nucleotides
15619 and 15620 are separated by 256 nucleotides
15620 and 15621 are separated by 743 nucleotides
15621 and 15622 are separated by 303 nucleotides
mRNA_7250: 15618 - BLAST ClpP/crotonase [Saitoella complicata NRRL Y-17804], at 1,218,970 to 1,220,341
15618
mRNA_7251: 15619 - Hypothetical Protein, at 1,220,664 to 1,222,024
15619
mRNA_7252: 15620 - Hypothetical Protein, at 1,222,281 to 1,223,804
15620
mRNA_7253: 15621 - KOG2497 Predicted methyltransferase, at 1,224,548 to 1,225,738
15621
mRNA_7254: 15622 - Hypothetical Protein, at 1,226,042 to 1,227,561
15622
Group
Condition
mRNA
_7250
mRNA
_7251
mRNA
_7252
mRNA
_7253
mRNA
_7254
15618
15619
15620
15621
15622
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.4
-0.5
-0.6
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.2
+0.0
-1.5
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.2
-0.2
-0.3
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.1
-0.0
-0.2
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.2
-0.1
-0.2
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
+0.3
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
+0.4
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.1
+0.6
-0.1
-0.4
auxotrophy
Dropout Complete
-0.1
-0.2
+0.7
-0.5
+0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.0
+0.3
+0.0
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.0
+0.4
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.0
-0.3
+0.3
+0.1
growth on oleic acid
YNB Glucose
-0.3
-0.0
+0.3
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.1
+0.3
+0.1
-0.2
auxotrophy
YNB Glucose
-0.0
-0.2
+0.3
-0.1
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
+0.3
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.3
+0.1
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.4
+0.6
+0.3
+0.1
growth on ypd
YPD
+0.3
+0.8
-0.3
-0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
+0.5
+0.2
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
+0.5
+0.1
+0.2
remove
mRNA_7250
plot
remove
mRNA_7251
plot
remove
mRNA_7252
remove
mRNA_7253
plot
remove
mRNA_7254
plot