Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15628 and 15629 are separated by 1296 nucleotides
15629 and 15630 are separated by 647 nucleotides
15630 and 15631 are separated by 573 nucleotides
15631 and 15632 are separated by 222 nucleotides
mRNA_7260: 15628 - K09230 SCAN SCAN domain-containing zinc finger protein, at 1,243,615 to 1,245,304
15628
mRNA_7261: 15629 - SUPERFAMILY--SSF51735, at 1,246,601 to 1,248,053
15629
mRNA_7262: 15630 - HMMPfam-Peptidase M50B-like-PF13398, at 1,248,701 to 1,250,915
15630
mRNA_7263: 15631 - K00615 E2.2.1.1, tktA, tktB transketolase, at 1,251,489 to 1,254,335
15631
mRNA_7264: 15632 - Hypothetical Protein, at 1,254,558 to 1,258,564
15632
Group
Condition
mRNA
_7260
mRNA
_7261
mRNA
_7262
mRNA
_7263
mRNA
_7264
15628
15629
15630
15631
15632
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.6
+0.0
N.D.
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.5
-0.1
N.D.
+0.2
growth on ypd
YPD
-0.2
+0.0
-0.1
N.D.
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.4
+0.2
N.D.
+0.1
auxotrophy
Dropout Complete
+0.2
-0.4
+0.0
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
+0.0
-0.3
-0.1
N.D.
+0.2
growth on oleic acid
YNB Oleic Acid
+0.2
-0.1
-0.1
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
-0.1
N.D.
+0.1
auxotrophy
YNB Glucose
+0.3
-0.3
-0.0
N.D.
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.3
+0.1
N.D.
+0.1
growth on oleic acid
YNB Glucose
+0.2
-0.0
-0.1
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.1
+0.1
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.1
+0.0
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.0
+0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.3
-0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.3
+0.0
N.D.
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
+0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.2
+0.1
N.D.
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.7
+0.0
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.6
+0.4
N.D.
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
+0.8
-0.2
N.D.
-0.0
remove
mRNA_7260
plot
remove
mRNA_7261
plot
remove
mRNA_7262
remove
mRNA_7263
plot
remove
mRNA_7264
plot