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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15635 and 15636 are separated by 324 nucleotides
15636 and 15637 are separated by 16 nucleotides
15637 and 15638 are separated by 263 nucleotides
15638 and 15639 are separated by 358 nucleotides
mRNA_7267: 15635 - Hypothetical Protein, at 1,262,924 to 1,263,981
15635
mRNA_7268: 15636 - Hypothetical Protein, at 1,264,306 to 1,264,888
15636
mRNA_7269: 15637 - Hypothetical Protein, at 1,264,905 to 1,266,240
15637
mRNA_7270: 15638 - ProSiteProfiles-TEA domain profile.-PS51088, at 1,266,504 to 1,267,966
15638
mRNA_7271: 15639 - HMMPfam-TEA/ATTS domain family-PF01285,ProSiteProfiles-TEA domain profile.-PS51088, at 1,268,325 to 1,269,363
15639
Group
Condition
mRNA
_7267
mRNA
_7268
mRNA
_7269
mRNA
_7270
mRNA
_7271
15635
15636
15637
15638
15639
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-1.7
-0.2
-0.3
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.6
-0.1
-0.5
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.8
-0.4
-0.1
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.2
-0.1
-0.5
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.1
-0.2
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
+0.0
-0.2
-0.2
+0.2
growth on ricinoleic acid
YNB Glucose
-0.3
-0.3
-0.0
+0.5
-0.3
auxotrophy
YNB Glucose
-1.0
+0.1
+0.1
+0.2
+0.0
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
+0.0
-0.2
+0.1
auxotrophy
Dropout Complete
-0.6
+0.2
-0.3
+0.2
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.3
-0.2
+0.4
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.4
+0.0
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.4
-0.4
+0.0
-0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.1
-0.1
+0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
+0.0
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.5
+0.3
-0.1
+0.3
+0.1
growth on oleic acid
YNB Glucose
-0.1
+0.1
+0.0
+0.1
+0.1
growth on ypd
YPD
+0.3
+0.0
-0.2
-0.1
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
-0.0
+0.1
+0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.6
+0.3
+0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
+0.3
+0.2
+0.2
+0.3
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