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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15637 and 15638 are separated by 263 nucleotides
15638 and 15639 are separated by 358 nucleotides
15639 and 15640 are separated by 1709 nucleotides
15640 and 15641 are separated by 449 nucleotides
mRNA_7269: 15637 - Hypothetical Protein, at 1,264,905 to 1,266,240
15637
mRNA_7270: 15638 - ProSiteProfiles-TEA domain profile.-PS51088, at 1,266,504 to 1,267,966
15638
mRNA_7271: 15639 - HMMPfam-TEA/ATTS domain family-PF01285,ProSiteProfiles-TEA domain profile.-PS51088, at 1,268,325 to 1,269,363
15639
mRNA_7272: 15640 - Hypothetical Protein, at 1,271,073 to 1,272,368
15640
mRNA_7273: 15641 - K15859 SKN7 osomolarity two-component system, response regulator SKN7, at 1,272,818 to 1,275,702
15641
Group
Condition
mRNA
_7269
mRNA
_7270
mRNA
_7271
mRNA
_7272
mRNA
_7273
15637
15638
15639
15640
15641
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.3
+0.0
-0.9
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.3
-0.1
+0.2
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.5
-0.2
-0.2
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.2
+0.3
-0.1
-1.0
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.3
-0.0
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.5
-0.1
+0.1
+0.4
growth on ypd
YPD
-0.2
-0.1
+0.3
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.0
-0.2
-0.1
+0.2
growth on oleic acid
YNB Oleic Acid
+0.0
-0.2
+0.1
-0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.1
-0.0
-0.2
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.2
-0.0
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.2
+0.2
+0.2
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.0
-0.1
-0.1
+0.5
growth on oleic acid
YNB Glucose
+0.0
+0.1
+0.1
-0.2
+0.4
growth on ricinoleic acid
YNB Glucose
-0.0
+0.5
-0.3
+0.3
+0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.3
+0.1
-0.1
+0.6
auxotrophy
Dropout Complete
-0.3
+0.2
+0.2
+0.0
+0.9
auxotrophy
YNB Glucose
+0.1
+0.2
+0.0
+0.2
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.2
+0.1
+0.3
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.4
-0.1
+0.4
+0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.1
-0.0
-0.3
+1.8
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