Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15643 and 15644 are separated by 85 nucleotides15644 and 15645 are separated by 272 nucleotides15645 and 15646 are separated by 235 nucleotides15646 and 15647 are separated by 1004 nucleotides mRNA_7275: 15643 - HMMPfam-Uncharacterized conserved protein (DUF2346)-PF09803, at 1,277,965 to 1,278,426 15643 mRNA_7276: 15644 - K17806 PAM17, TIM23 mitochondrial import inner membrane translocase subunit TIM23, at 1,278,512 to 1,279,383 15644 mRNA_7277: 15645 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1,279,656 to 1,282,236 15645 mRNA_7278: 15646 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1,282,472 to 1,285,388 15646 mRNA_7279: 15647 - K13698 ABHD4 abhydrolase domain-containing protein 4, at 1,286,393 to 1,287,273 15647
Group Condition mRNA_7275 mRNA_7276 mRNA_7277 mRNA_7278 mRNA_7279
15643 15644 15645 15646 15647
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.3 -0.5 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.5 -0.0 +0.3 -0.3
growth on oleic acid YNB Oleic Acid N.D. -0.3 +0.0 -0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.4 +0.1 -0.1 +0.0
growth on oleic acid YNB Glucose N.D. -0.1 +0.0 +0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 +0.3 +0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.4 +0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.1 -0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 -0.1 +0.2 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.0 -0.0 -0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.4 -0.0 -0.2 +0.6
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 -0.0 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 +0.0 +0.1 +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.2 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 +0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 +0.2 +0.3 -0.1
auxotrophy YNB Glucose N.D. -0.1 +0.3 +0.0 +0.2
growth on ypd YPD N.D. -0.1 +0.1 -0.0 +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 +0.3 +0.2 +0.3
auxotrophy Dropout Complete N.D. +0.2 +0.1 -0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 +0.4 +0.8 +0.6
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