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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15644 and 15645 are separated by 272 nucleotides
15645 and 15646 are separated by 235 nucleotides
15646 and 15647 are separated by 1004 nucleotides
15647 and 15648 are separated by 257 nucleotides
mRNA_7276: 15644 - K17806 PAM17, TIM23 mitochondrial import inner membrane translocase subunit TIM23, at 1,278,512 to 1,279,383
15644
mRNA_7277: 15645 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1,279,656 to 1,282,236
15645
mRNA_7278: 15646 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1,282,472 to 1,285,388
15646
mRNA_7279: 15647 - K13698 ABHD4 abhydrolase domain-containing protein 4, at 1,286,393 to 1,287,273
15647
mRNA_7280: 15648 - Hypothetical Protein, at 1,287,531 to 1,288,393
15648
Group
Condition
mRNA
_7276
mRNA
_7277
mRNA
_7278
mRNA
_7279
mRNA
_7280
15644
15645
15646
15647
15648
ypd buoyancy
40 hrs No Buoyancy Separation
-1.3
-0.5
+0.2
-0.4
-1.0
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.1
-0.1
+0.0
-0.7
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
+0.2
+0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.1
+0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.0
-0.2
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.0
+0.3
-0.3
+0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.0
-0.1
+0.2
+0.1
growth on oleic acid
YNB Oleic Acid
-0.3
+0.0
-0.0
-0.2
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.0
+0.1
+0.2
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.0
-0.2
+0.6
+0.4
growth on ricinoleic acid
YNB Glucose
+0.1
+0.2
-0.0
+0.0
+0.2
auxotrophy
YNB Glucose
-0.1
+0.3
+0.0
+0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.4
+0.1
-0.4
+0.5
growth on oleic acid
YNB Glucose
-0.1
+0.0
+0.0
-0.1
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.3
+0.0
-0.1
+0.6
auxotrophy
Dropout Complete
+0.2
+0.1
-0.1
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.1
+0.1
+0.1
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.2
+0.3
-0.1
+0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.3
+0.2
+0.3
+0.7
growth on ypd
YPD
-0.1
+0.1
-0.0
+0.4
+1.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.4
+0.8
+0.6
+0.7
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mRNA_7276
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mRNA_7277
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mRNA_7278
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mRNA_7280
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