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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15646 and 15647 are separated by 1004 nucleotides
15647 and 15648 are separated by 257 nucleotides
15648 and 15649 are separated by 468 nucleotides
15649 and 15650 are separated by 150 nucleotides
mRNA_7278: 15646 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1,282,472 to 1,285,388
15646
mRNA_7279: 15647 - K13698 ABHD4 abhydrolase domain-containing protein 4, at 1,286,393 to 1,287,273
15647
mRNA_7280: 15648 - Hypothetical Protein, at 1,287,531 to 1,288,393
15648
mRNA_7281: 15649 - HMMPfam-FAR1 DNA-binding domain-PF03101, at 1,288,862 to 1,290,260
15649
mRNA_7282: 15650 - HMMPfam-Amidohydrolase family-PF07969,HMMPfam-Amidohydrolase-PF13594,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 1,290,411 to 1,292,739
15650
Group
Condition
mRNA
_7278
mRNA
_7279
mRNA
_7280
mRNA
_7281
mRNA
_7282
15646
15647
15648
15649
15650
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.4
-1.0
-0.4
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
-0.7
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.0
-0.3
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.2
-0.2
-0.0
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.2
+0.1
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.2
-0.1
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.0
+0.0
+0.2
+0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.4
+0.5
+0.1
-0.0
auxotrophy
Dropout Complete
-0.1
+0.3
+0.1
+0.2
-0.1
growth on oleic acid
YNB Glucose
+0.0
-0.1
+0.7
+0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.1
+0.6
+0.4
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.2
+0.0
+0.0
+0.2
auxotrophy
YNB Glucose
+0.0
+0.2
+0.1
+0.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
-0.3
+0.5
+0.0
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.6
+0.4
-0.1
+0.0
growth on oleic acid
YNB Oleic Acid
-0.0
-0.2
+0.6
+0.4
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.1
+0.6
+0.0
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.1
+0.6
-0.0
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.3
+0.7
+0.1
+0.3
growth on ypd
YPD
-0.0
+0.4
+1.1
+0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.8
+0.6
+0.7
+0.2
+0.4
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