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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15648 and 15649 are separated by 468 nucleotides
15649 and 15650 are separated by 150 nucleotides
15650 and 15651 are separated by 441 nucleotides
15651 and 15652 are separated by 305 nucleotides
mRNA_7280: 15648 - Hypothetical Protein, at 1,287,531 to 1,288,393
15648
mRNA_7281: 15649 - HMMPfam-FAR1 DNA-binding domain-PF03101, at 1,288,862 to 1,290,260
15649
mRNA_7282: 15650 - HMMPfam-Amidohydrolase family-PF07969,HMMPfam-Amidohydrolase-PF13594,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 1,290,411 to 1,292,739
15650
mRNA_7283: 15651 - KOG1535 Predicted fumarylacetoacetate hydralase, at 1,293,181 to 1,295,231
15651
mRNA_7284: 15652 - KOG0537 Cytochrome b5, at 1,295,537 to 1,296,172
15652
Group
Condition
mRNA
_7280
mRNA
_7281
mRNA
_7282
mRNA
_7283
mRNA
_7284
15648
15649
15650
15651
15652
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
-0.4
-0.1
+0.1
-2.2
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.1
-0.2
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.0
-0.1
-0.2
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.7
-0.2
-0.0
+0.1
+0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.0
+0.0
-0.2
-0.0
growth on ricinoleic acid
YNB Glucose
+0.2
+0.1
-0.2
-0.4
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-0.1
+0.0
-0.3
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
+0.4
-0.5
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.2
-0.1
+0.0
+0.5
auxotrophy
Dropout Complete
+0.1
+0.2
-0.1
-0.1
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
+0.1
-0.0
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
+0.0
-0.0
+0.1
-0.0
growth on oleic acid
YNB Glucose
+0.7
+0.1
-0.2
-0.6
+0.7
facs on lipid accumulation
Sorted High BODIPY Gate
+0.7
+0.2
+0.4
-0.5
+0.0
auxotrophy
YNB Glucose
+0.1
+0.4
-0.1
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
-0.0
+0.2
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.0
+0.2
+0.4
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
+0.0
+0.2
+0.0
+0.3
growth on oleic acid
YNB Oleic Acid
+0.6
+0.4
-0.1
-0.1
+0.6
facs on lipid accumulation
Sorted No BODIPY Gate
+0.7
+0.1
+0.3
+0.0
+0.4
growth on ypd
YPD
+1.1
+0.1
+0.1
+0.2
+0.8
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