Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15649 and 15650 are separated by 150 nucleotides
15650 and 15651 are separated by 441 nucleotides
15651 and 15652 are separated by 305 nucleotides
15652 and 15653 are separated by 394 nucleotides
mRNA_7281: 15649 - HMMPfam-FAR1 DNA-binding domain-PF03101, at 1,288,862 to 1,290,260
15649
mRNA_7282: 15650 - HMMPfam-Amidohydrolase family-PF07969,HMMPfam-Amidohydrolase-PF13594,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 1,290,411 to 1,292,739
15650
mRNA_7283: 15651 - KOG1535 Predicted fumarylacetoacetate hydralase, at 1,293,181 to 1,295,231
15651
mRNA_7284: 15652 - KOG0537 Cytochrome b5, at 1,295,537 to 1,296,172
15652
mRNA_7285: 15653 - HMMPfam-GPR1/FUN34/yaaH family-PF01184,ProSitePatterns-GPR1/FUN34/yaaH family signature.-PS01114, at 1,296,567 to 1,298,156
15653
Group
Condition
mRNA
_7281
mRNA
_7282
mRNA
_7283
mRNA
_7284
mRNA
_7285
15649
15650
15651
15652
15653
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.1
+0.1
-2.2
-0.9
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
+0.1
-0.2
-0.7
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.0
-0.2
-0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
-0.2
-0.3
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.0
-0.3
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.2
+0.2
-0.2
-0.5
growth on ricinoleic acid
YNB Glucose
+0.1
-0.2
-0.4
+0.4
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.0
+0.1
+0.4
-0.5
growth on oleic acid
YNB Glucose
+0.1
-0.2
-0.6
+0.7
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.4
-0.5
+0.0
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.5
-0.2
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.1
+0.0
+0.5
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.0
-0.2
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.0
+0.1
-0.0
+0.1
auxotrophy
YNB Glucose
+0.4
-0.1
+0.1
+0.3
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.2
+0.0
+0.3
-0.2
growth on oleic acid
YNB Oleic Acid
+0.4
-0.1
-0.1
+0.6
-0.4
auxotrophy
Dropout Complete
+0.2
-0.1
-0.1
+0.4
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.2
+0.4
+0.2
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.3
+0.0
+0.4
+0.1
growth on ypd
YPD
+0.1
+0.1
+0.2
+0.8
+0.2
remove
mRNA_7281
plot
remove
mRNA_7282
plot
remove
mRNA_7283
remove
mRNA_7284
plot
remove
mRNA_7285
plot