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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15660 and 15661 are separated by 232 nucleotides
15661 and 15662 are separated by 610 nucleotides
15662 and 15663 are separated by 279 nucleotides
15663 and 15664 are separated by 336 nucleotides
mRNA_7292: 15660 - SUPERFAMILY--SSF56112, at 1,318,921 to 1,320,950
15660
mRNA_7293: 15661 - Hypothetical Protein, at 1,321,183 to 1,322,494
15661
mRNA_7294: 15662 - HMMPfam-F-box-like-PF12937, at 1,323,105 to 1,324,702
15662
mRNA_7295: 15663 - K10967 KTR1_3 alpha 1,2-mannosyltransferase, at 1,324,982 to 1,326,744
15663
mRNA_7296: 15664 - Hypothetical Protein, at 1,327,081 to 1,328,233
15664
Group
Condition
mRNA
_7292
mRNA
_7293
mRNA
_7294
mRNA
_7295
mRNA
_7296
15660
15661
15662
15663
15664
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.4
+0.2
-0.4
-1.2
auxotrophy
Dropout Complete
-0.1
-0.2
-0.3
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
-0.1
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
-0.2
-0.0
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.0
+0.2
-0.1
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.3
+0.4
-0.1
-0.5
auxotrophy
YNB Glucose
+0.1
-0.0
+0.1
-0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.0
+0.4
-0.0
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.0
+0.4
+0.0
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.5
+0.5
-0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.0
+0.4
-0.2
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.2
+0.3
-0.1
+0.3
growth on ricinoleic acid
YNB Glucose
+0.3
-0.4
+0.4
-0.2
+0.5
growth on ypd
YPD
+0.1
+0.4
+0.4
-0.0
+0.0
growth on oleic acid
YNB Glucose
+0.4
+0.1
+0.3
-0.1
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.0
+0.7
-0.3
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.7
+0.1
-0.0
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.7
-0.2
+0.2
+0.2
+0.3
growth on oleic acid
YNB Oleic Acid
+0.2
+0.4
+0.4
+0.1
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
+0.2
+0.4
+0.4
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
+0.3
+0.2
+0.3
+0.5
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