Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15660 and 15661 are separated by 232 nucleotides15661 and 15662 are separated by 610 nucleotides15662 and 15663 are separated by 279 nucleotides15663 and 15664 are separated by 336 nucleotides mRNA_7292: 15660 - SUPERFAMILY--SSF56112, at 1,318,921 to 1,320,950 15660 mRNA_7293: 15661 - Hypothetical Protein, at 1,321,183 to 1,322,494 15661 mRNA_7294: 15662 - HMMPfam-F-box-like-PF12937, at 1,323,105 to 1,324,702 15662 mRNA_7295: 15663 - K10967 KTR1_3 alpha 1,2-mannosyltransferase, at 1,324,982 to 1,326,744 15663 mRNA_7296: 15664 - Hypothetical Protein, at 1,327,081 to 1,328,233 15664
Group Condition mRNA_7292 mRNA_7293 mRNA_7294 mRNA_7295 mRNA_7296
15660 15661 15662 15663 15664
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.4 +0.2 -0.4 -1.2
auxotrophy Dropout Complete -0.1 -0.2 -0.3 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 -0.1 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.2 -0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.0 +0.2 -0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.3 +0.4 -0.1 -0.5
auxotrophy YNB Glucose +0.1 -0.0 +0.1 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 +0.4 -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.0 +0.4 +0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.5 +0.5 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.0 +0.4 -0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.2 +0.3 -0.1 +0.3
growth on ricinoleic acid YNB Glucose +0.3 -0.4 +0.4 -0.2 +0.5
growth on ypd YPD +0.1 +0.4 +0.4 -0.0 +0.0
growth on oleic acid YNB Glucose +0.4 +0.1 +0.3 -0.1 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.0 +0.7 -0.3 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +0.1 -0.0 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 -0.2 +0.2 +0.2 +0.3
growth on oleic acid YNB Oleic Acid +0.2 +0.4 +0.4 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 +0.2 +0.4 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 +0.3 +0.2 +0.3 +0.5
remove
mRNA_7292
plot
remove
mRNA_7293
plot
remove
mRNA_7294
remove
mRNA_7295
plot
remove
mRNA_7296
plot