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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15663 and 15664 are separated by 336 nucleotides
15664 and 15665 are separated by 278 nucleotides
15665 and 15666 are separated by 379 nucleotides
15666 and 15667 are separated by 1255 nucleotides
mRNA_7295: 15663 - K10967 KTR1_3 alpha 1,2-mannosyltransferase, at 1,324,982 to 1,326,744
15663
mRNA_7296: 15664 - Hypothetical Protein, at 1,327,081 to 1,328,233
15664
mRNA_7297: 15665 - Hypothetical Protein, at 1,328,512 to 1,329,745
15665
mRNA_7298: 15666 - Hypothetical Protein, at 1,330,125 to 1,331,364
15666
mRNA_7299: 15667 - KOG1721 FOG Zn-finger, at 1,332,620 to 1,333,113
15667
Group
Condition
mRNA
_7295
mRNA
_7296
mRNA
_7297
mRNA
_7298
mRNA
_7299
15663
15664
15665
15666
15667
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-1.2
-0.6
+0.2
-0.9
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.0
-0.0
-0.0
-0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.3
+0.1
-0.0
-0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
+0.2
+0.0
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.2
+0.2
+0.0
-0.2
auxotrophy
Dropout Complete
-0.1
-0.2
+0.4
-0.2
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.5
+0.9
-0.2
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.3
+0.4
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.0
+0.3
-0.1
+0.0
growth on ypd
YPD
-0.0
+0.0
-0.1
+0.5
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.2
+0.6
+0.0
-0.0
auxotrophy
YNB Glucose
-0.0
-0.1
+0.3
+0.1
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.4
+0.4
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.1
+0.3
-0.3
+0.1
growth on oleic acid
YNB Glucose
-0.1
+0.3
+0.1
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.5
+0.1
-0.0
-0.0
growth on ricinoleic acid
YNB Glucose
-0.2
+0.5
+0.4
+0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.3
+0.4
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.3
+0.2
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
+0.3
+0.3
+0.0
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.5
+0.4
-0.3
+0.6
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