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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15669 and 15670 are separated by 489 nucleotides
15670 and 15671 are separated by 156 nucleotides
15671 and 15672 are separated by 594 nucleotides
15672 and 15673 are separated by 194 nucleotides
mRNA_7301: 15669 - Hypothetical Protein, at 1,346,160 to 1,348,267
15669
mRNA_7302: 15670 - Hypothetical Protein, at 1,348,757 to 1,350,807
15670
mRNA_7303: 15671 - KOG1269 SAM-dependent methyltransferases, at 1,350,964 to 1,351,884
15671
mRNA_7304: 15672 - Hypothetical Protein, at 1,352,479 to 1,355,080
15672
mRNA_7305: 15673 - Hypothetical Protein, at 1,355,275 to 1,355,712
15673
Group
Condition
mRNA
_7301
mRNA
_7302
mRNA
_7303
mRNA
_7304
mRNA
_7305
15669
15670
15671
15672
15673
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.2
-0.4
-0.4
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.0
-0.2
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.6
-0.1
+0.2
+0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.1
+0.2
-0.0
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.4
-0.1
+0.3
+0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.3
-0.3
+0.1
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.0
+0.2
+0.1
-0.1
growth on ricinoleic acid
YNB Glucose
+0.0
+0.2
-0.4
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.1
+0.1
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.1
+0.2
+0.2
+0.1
growth on ypd
YPD
-0.1
+0.2
-0.1
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
-0.3
+0.0
+0.2
+0.2
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.3
+0.1
+0.2
-0.5
auxotrophy
YNB Glucose
+0.2
+0.0
-0.1
+0.0
+0.0
auxotrophy
Dropout Complete
+0.1
+0.1
+0.1
+0.0
+0.0
growth on oleic acid
YNB Glucose
-0.2
+0.0
+0.2
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.1
+0.1
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.1
+0.0
-0.1
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.4
-0.0
-0.1
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.1
-0.1
+0.4
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.2
+0.5
+0.2
-0.1
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