Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15680 and 15681 are separated by 395 nucleotides
15681 and 15682 are separated by 301 nucleotides
15682 and 15683 are separated by 373 nucleotides
15683 and 15684 are separated by 11 nucleotides
mRNA_7312: 15680 - HMMPfam-Protein of unknown function (DUF3429)-PF11911, at 1,373,986 to 1,375,689
15680
mRNA_7313: 15681 - K00417 QCR7, UQCRB ubiquinol-cytochrome c reductase subunit 7, at 1,376,085 to 1,377,067
15681
mRNA_7314: 15682 - Hypothetical Protein, at 1,377,369 to 1,379,605
15682
mRNA_7315: 15683 - K05527 bolA BolA protein, at 1,379,979 to 1,380,539
15683
mRNA_7316: 15684 - KOG4178 Soluble epoxide hydrolase, at 1,380,551 to 1,382,072
15684
Group
Condition
mRNA
_7312
mRNA
_7313
mRNA
_7314
mRNA
_7315
mRNA
_7316
15680
15681
15682
15683
15684
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
-0.9
-0.3
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
N.D.
-0.5
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
N.D.
+0.1
-0.4
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
N.D.
-0.1
-0.5
-0.4
growth on oleic acid
YNB Glucose
-0.1
N.D.
+0.3
-0.3
-1.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
+0.0
-0.4
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
N.D.
-1.1
+0.6
-0.7
growth on ricinoleic acid
YNB Glucose
-0.1
N.D.
-0.2
+0.1
-0.6
growth on ypd
YPD
+0.1
N.D.
-0.2
-0.8
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
N.D.
-0.9
-0.4
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
N.D.
-0.0
-0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.0
N.D.
-0.0
-0.3
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
N.D.
+0.2
+0.4
-0.8
auxotrophy
YNB Glucose 75mM Methionine
-0.2
N.D.
+0.2
+0.7
-0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
N.D.
-0.4
+0.7
-0.4
growth on oleic acid
YNB Oleic Acid
+0.0
N.D.
+0.6
-0.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
N.D.
-0.0
+1.2
-0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
N.D.
+0.2
+0.8
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.0
N.D.
+0.4
+0.4
+0.1
auxotrophy
Dropout Complete
-0.3
N.D.
+0.9
+1.2
-0.3
auxotrophy
YNB Glucose
-0.1
N.D.
+0.6
+1.5
-0.5
remove
mRNA_7312
plot
remove
mRNA_7313
plot
remove
mRNA_7314
remove
mRNA_7315
plot
remove
mRNA_7316
plot