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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15681 and 15682 are separated by 301 nucleotides
15682 and 15683 are separated by 373 nucleotides
15683 and 15684 are separated by 11 nucleotides
15684 and 15685 are separated by 454 nucleotides
mRNA_7313: 15681 - K00417 QCR7, UQCRB ubiquinol-cytochrome c reductase subunit 7, at 1,376,085 to 1,377,067
15681
mRNA_7314: 15682 - Hypothetical Protein, at 1,377,369 to 1,379,605
15682
mRNA_7315: 15683 - K05527 bolA BolA protein, at 1,379,979 to 1,380,539
15683
mRNA_7316: 15684 - KOG4178 Soluble epoxide hydrolase, at 1,380,551 to 1,382,072
15684
mRNA_7317: 15685 - K01652 E2.2.1.6L, ilvB, ilvG, ilvI acetolactate synthase I/II/III large subunit, at 1,382,527 to 1,385,139
15685
Group
Condition
mRNA
_7313
mRNA
_7314
mRNA
_7315
mRNA
_7316
mRNA
_7317
15681
15682
15683
15684
15685
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.9
-0.3
-0.4
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-1.1
+0.6
-0.7
N.D.
growth on oleic acid
YNB Glucose
N.D.
+0.3
-0.3
-1.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.5
-0.4
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.5
-0.2
-0.3
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.9
-0.4
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
-0.4
-0.6
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.0
-0.4
-0.5
N.D.
growth on ypd
YPD
N.D.
-0.2
-0.8
+0.1
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
-0.2
+0.1
-0.6
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
-0.1
-0.3
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.0
-0.3
+0.0
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
+0.4
-0.8
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
+0.7
-0.9
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.4
+0.7
-0.4
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
+0.6
-0.1
-0.3
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.0
+1.2
-0.8
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
+0.8
-0.3
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.4
+0.4
+0.1
N.D.
auxotrophy
YNB Glucose
N.D.
+0.6
+1.5
-0.5
N.D.
auxotrophy
Dropout Complete
N.D.
+0.9
+1.2
-0.3
N.D.
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