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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15682 and 15683 are separated by 373 nucleotides
15683 and 15684 are separated by 11 nucleotides
15684 and 15685 are separated by 454 nucleotides
15685 and 15686 are separated by 335 nucleotides
mRNA_7314: 15682 - Hypothetical Protein, at 1,377,369 to 1,379,605
15682
mRNA_7315: 15683 - K05527 bolA BolA protein, at 1,379,979 to 1,380,539
15683
mRNA_7316: 15684 - KOG4178 Soluble epoxide hydrolase, at 1,380,551 to 1,382,072
15684
mRNA_7317: 15685 - K01652 E2.2.1.6L, ilvB, ilvG, ilvI acetolactate synthase I/II/III large subunit, at 1,382,527 to 1,385,139
15685
mRNA_7318: 15686 - KOG4018 Uncharacterized conserved protein, contains RWD domain, at 1,385,475 to 1,386,748
15686
Group
Condition
mRNA
_7314
mRNA
_7315
mRNA
_7316
mRNA
_7317
mRNA
_7318
15682
15683
15684
15685
15686
facs on lipid accumulation
Sorted No BODIPY Gate
-0.9
-0.3
-0.4
N.D.
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
-0.4
+0.3
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.5
-0.4
N.D.
-0.3
growth on oleic acid
YNB Glucose
+0.3
-0.3
-1.1
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.2
-0.3
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.4
-0.5
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.4
-0.6
N.D.
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.1
+0.6
-0.7
N.D.
+0.5
growth on ypd
YPD
-0.2
-0.8
+0.1
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
-0.3
N.D.
-0.0
growth on ricinoleic acid
YNB Glucose
-0.2
+0.1
-0.6
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.4
-0.8
N.D.
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.3
+0.0
N.D.
+0.1
growth on oleic acid
YNB Oleic Acid
+0.6
-0.1
-0.3
N.D.
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.7
-0.9
N.D.
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+1.2
-0.8
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.7
-0.4
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.8
-0.3
N.D.
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.4
+0.4
+0.1
N.D.
+0.1
auxotrophy
Dropout Complete
+0.9
+1.2
-0.3
N.D.
+0.1
auxotrophy
YNB Glucose
+0.6
+1.5
-0.5
N.D.
+0.4
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