Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15693 and 15694 are separated by 207 nucleotides15694 and 15695 are separated by 218 nucleotides15695 and 15696 are separated by 297 nucleotides15696 and 15697 are separated by 1066 nucleotides mRNA_7325: 15693 - K01640 E4.1.3.4, HMGCL, hmgL hydroxymethylglutaryl-CoA lyase, at 10,926 to 12,277 15693 mRNA_7326: 15694 - K01969 E6.4.1.4B 3-methylcrotonyl-CoA carboxylase beta subunit, at 12,485 to 14,861 15694 mRNA_7327: 15695 - KOG2883 NIPSNAP1 protein, at 15,080 to 16,504 15695 mRNA_7328: 15696 - KOG1339 Aspartyl protease, at 16,802 to 18,584 15696 mRNA_7329: 15697 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 19,651 to 22,039 15697
Group Condition mRNA_7325 mRNA_7326 mRNA_7327 mRNA_7328 mRNA_7329
15693 15694 15695 15696 15697
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.5 -0.6 +0.3 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.7 +0.1 -0.1 -0.2
auxotrophy Dropout Complete +0.3 -0.6 -0.1 +0.0 -0.3
auxotrophy YNB Glucose +0.1 -0.5 +0.0 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 -0.2 +0.0 -0.2
growth on ypd YPD +0.4 -0.2 -0.5 +0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 -0.2 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4 +0.3 -0.0 -0.0
growth on oleic acid YNB Oleic Acid +0.1 -0.1 +0.1 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.1 +0.0 -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 +0.1 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.3 -0.0 +0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 +0.4 -0.1 -0.2
growth on ricinoleic acid YNB Glucose +0.1 -0.0 +0.2 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.0 -0.2 +0.1 +0.0
growth on oleic acid YNB Glucose +0.3 +0.1 +0.1 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 -0.0 -0.1 -0.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.2 +0.2 -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.5 -0.1 +0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 +0.2 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.3 +0.5 +0.1 +0.2
remove
mRNA_7325
plot
remove
mRNA_7326
plot
remove
mRNA_7327
remove
mRNA_7328
plot
remove
mRNA_7329
plot