Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15696 and 15697 are separated by 1066 nucleotides
15697 and 15698 are separated by 516 nucleotides
15698 and 15699 are separated by 380 nucleotides
15699 and 15700 are separated by 698 nucleotides
mRNA_7328: 15696 - KOG1339 Aspartyl protease, at 16,802 to 18,584
15696
mRNA_7329: 15697 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 19,651 to 22,039
15697
mRNA_7330: 15698 - KOG0409 Predicted dehydrogenase, at 22,556 to 24,304
15698
mRNA_7331: 15699 - KOG1666 V-SNARE, at 24,685 to 25,773
15699
mRNA_7332: 15700 - K05542 DUS1 tRNA-dihydrouridine synthase 1, at 26,472 to 27,994
15700
Group
Condition
mRNA
_7328
mRNA
_7329
mRNA
_7330
mRNA
_7331
mRNA
_7332
15696
15697
15698
15699
15700
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.1
-1.2
-3.1
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.2
-1.1
-1.5
-1.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.1
+0.0
-2.7
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.2
+0.6
-2.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
-1.1
-0.3
-0.4
auxotrophy
YNB Glucose
-0.2
-0.1
-1.3
-0.1
-0.4
auxotrophy
Dropout Complete
+0.0
-0.3
-0.8
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.2
-0.6
-1.0
-0.5
growth on ypd
YPD
+0.1
-0.3
-0.6
-0.7
-0.0
growth on oleic acid
YNB Oleic Acid
-0.1
-0.3
-1.0
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.0
-0.4
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.0
-0.7
+0.5
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.0
-0.6
+0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.2
+0.2
-0.7
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.2
-1.0
+0.3
+0.5
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.0
-0.4
+0.1
+0.2
growth on ricinoleic acid
YNB Glucose
+0.0
-0.0
-0.4
+0.4
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.1
-0.3
-0.6
+0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.2
+0.1
+0.5
growth on oleic acid
YNB Glucose
-0.1
-0.0
-0.2
+0.6
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.2
-0.2
+0.9
-0.3
remove
mRNA_7328
plot
remove
mRNA_7329
plot
remove
mRNA_7330
remove
mRNA_7331
plot
remove
mRNA_7332
plot