Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15696 and 15697 are separated by 1066 nucleotides15697 and 15698 are separated by 516 nucleotides15698 and 15699 are separated by 380 nucleotides15699 and 15700 are separated by 698 nucleotides mRNA_7328: 15696 - KOG1339 Aspartyl protease, at 16,802 to 18,584 15696 mRNA_7329: 15697 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 19,651 to 22,039 15697 mRNA_7330: 15698 - KOG0409 Predicted dehydrogenase, at 22,556 to 24,304 15698 mRNA_7331: 15699 - KOG1666 V-SNARE, at 24,685 to 25,773 15699 mRNA_7332: 15700 - K05542 DUS1 tRNA-dihydrouridine synthase 1, at 26,472 to 27,994 15700
Group Condition mRNA_7328 mRNA_7329 mRNA_7330 mRNA_7331 mRNA_7332
15696 15697 15698 15699 15700
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.1 -1.2 -3.1 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.2 -1.1 -1.5 -1.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 +0.0 -2.7 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.2 +0.6 -2.2 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -1.1 -0.3 -0.4
auxotrophy YNB Glucose -0.2 -0.1 -1.3 -0.1 -0.4
auxotrophy Dropout Complete +0.0 -0.3 -0.8 -0.4 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 -0.6 -1.0 -0.5
growth on ypd YPD +0.1 -0.3 -0.6 -0.7 -0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.3 -1.0 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.0 -0.4 -0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.0 -0.7 +0.5 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.0 -0.6 +0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 +0.2 -0.7 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 -1.0 +0.3 +0.5
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 -0.4 +0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.0 -0.0 -0.4 +0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.1 -0.3 -0.6 +0.6
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.2 +0.1 +0.5
growth on oleic acid YNB Glucose -0.1 -0.0 -0.2 +0.6 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.2 -0.2 +0.9 -0.3
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