Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15706 and 15707 are separated by 378 nucleotides15707 and 15708 are separated by 184 nucleotides15708 and 15709 are separated by 93 nucleotides15709 and 15710 are separated by 463 nucleotides mRNA_7338: 15706 - K00451 HGD, hmgA homogentisate 1,2-dioxygenase, at 35,529 to 37,856 15706 mRNA_7339: 15707 - HMMPfam-Protein of unknown function (DUF1649)-PF07855, at 38,235 to 39,594 15707 mRNA_7340: 15708 - K08073 PNKP bifunctional polynucleotide phosphatase/kinase, at 39,779 to 41,768 15708 mRNA_7341: 15709 - KOG4062 6-O-methylguanine-DNA methyltransferase MGMT/MGT1, involved in DNA repair, at 41,862 to 42,699 15709 mRNA_7342: 15710 - Hypothetical Protein, at 43,163 to 45,525 15710
Group Condition mRNA_7338 mRNA_7339 mRNA_7340 mRNA_7341 mRNA_7342
15706 15707 15708 15709 15710
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.6 -0.4 -0.1 +0.5
growth on ypd YPD -0.1 -0.3 -0.0 -0.4 +0.2
growth on ricinoleic acid YNB Glucose -0.3 +0.2 -0.0 +0.6 -0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.6 +0.1 +0.2 +0.0
auxotrophy YNB Glucose +0.1 +0.1 +0.2 -0.5 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 +0.1 -0.3 +0.5
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.4 -0.0 -0.5 +0.2
auxotrophy Dropout Complete -0.1 +0.3 +0.2 -0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.2 +0.1 -0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.6 +0.5 -0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 -0.0 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.1 +0.1 +0.2 +0.1
growth on oleic acid YNB Glucose +0.3 +0.0 +0.1 -0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.3 -0.1 -0.2 +0.5
growth on oleic acid YNB Oleic Acid +0.1 +0.2 +0.2 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.4 +0.3 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.5 -0.1 -0.1 +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.5 +0.1 +0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.5 +0.1 +0.5 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.4 +0.1 +0.2 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.6 +0.1 +0.6 +0.0
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