Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15711 and 15712 are separated by 227 nucleotides15712 and 15713 are separated by 516 nucleotides15713 and 15714 are separated by 1797 nucleotides15714 and 15715 are separated by 282 nucleotides mRNA_7343: 15711 - K04798 pfdB, PFDN6 prefoldin beta subunit, at 45,735 to 46,573 15711 mRNA_7344: 15712 - K01697 E4.2.1.22, CBS cystathionine beta-synthase, at 46,801 to 48,602 15712 mRNA_7345: 15713 - K00264 GLT1 glutamate synthase (NADPH/NADH), at 49,119 to 56,418 15713 mRNA_7346: 15714 - Hypothetical Protein, at 58,216 to 59,419 15714 mRNA_7347: 15715 - K09495 CCT3, TRIC5 T-complex protein 1 subunit gamma, at 59,702 to 62,348 15715
Group Condition mRNA_7343 mRNA_7344 mRNA_7345 mRNA_7346 mRNA_7347
15711 15712 15713 15714 15715
ypd buoyancy 40 hrs No Buoyancy Separation -2.2 -0.6 +0.1 +0.7 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.8 -0.6 -0.0 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -1.4 -0.0 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.4 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.5 -0.6 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -1.2 +0.1 +0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.4 -0.0 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.3 +0.1 -0.3 N.D.
auxotrophy Dropout Complete +0.7 -0.5 +0.1 -0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.7 +0.1 +1.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.3 +0.0 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.6 -0.5 -0.1 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 -0.6 +0.1 -0.2 N.D.
auxotrophy YNB Glucose +0.5 -0.3 -0.0 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.0 -0.7 -0.1 +0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.2 -0.2 +0.0 +0.8 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 +0.2 +0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.8 -0.5 +0.0 +0.2 N.D.
growth on ypd YPD +0.3 -0.1 +0.1 +0.4 N.D.
growth on oleic acid YNB Glucose +0.5 +0.1 +0.2 +0.4 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.6 +0.2 +0.7 N.D.
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