Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15712 and 15713 are separated by 516 nucleotides15713 and 15714 are separated by 1797 nucleotides15714 and 15715 are separated by 282 nucleotides15715 and 15716 are separated by 374 nucleotides mRNA_7344: 15712 - K01697 E4.2.1.22, CBS cystathionine beta-synthase, at 46,801 to 48,602 15712 mRNA_7345: 15713 - K00264 GLT1 glutamate synthase (NADPH/NADH), at 49,119 to 56,418 15713 mRNA_7346: 15714 - Hypothetical Protein, at 58,216 to 59,419 15714 mRNA_7347: 15715 - K09495 CCT3, TRIC5 T-complex protein 1 subunit gamma, at 59,702 to 62,348 15715 mRNA_7348: 15716 - KOG0364 Chaperonin complex component, TCP-1 gamma subunit (CCT3), at 62,723 to 63,875 15716
Group Condition mRNA_7344 mRNA_7345 mRNA_7346 mRNA_7347 mRNA_7348
15712 15713 15714 15715 15716
facs on lipid accumulation Sorted No BODIPY Gate -1.4 -0.0 +0.1 N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.1 -0.0 N.D. -0.9
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.0 +0.2 N.D. -1.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 +0.1 -0.2 N.D. -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.0 +0.0 N.D. -1.1
auxotrophy YNB Glucose -0.3 -0.0 +0.1 N.D. -1.0
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 +0.1 +0.5 N.D. -0.5
auxotrophy Dropout Complete -0.5 +0.1 -0.4 N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 -0.1 +0.2 N.D. -0.3
ypd buoyancy 40 hrs High Buoyancy -0.6 -0.0 -0.2 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.1 -0.3 N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.6 -0.2 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.1 +0.1 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.0 +0.4 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 +0.4 N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 +0.1 +1.1 N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.2 +0.0 +0.8 N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.1 +0.7 N.D. +0.0
growth on oleic acid YNB Glucose +0.1 +0.2 +0.4 N.D. -0.1
growth on ypd YPD -0.1 +0.1 +0.4 N.D. +0.4
growth on oleic acid YNB Oleic Acid +0.6 +0.2 +0.7 N.D. -0.2
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