Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15713 and 15714 are separated by 1797 nucleotides15714 and 15715 are separated by 282 nucleotides15715 and 15716 are separated by 374 nucleotides15716 and 15717 are separated by 143 nucleotides mRNA_7345: 15713 - K00264 GLT1 glutamate synthase (NADPH/NADH), at 49,119 to 56,418 15713 mRNA_7346: 15714 - Hypothetical Protein, at 58,216 to 59,419 15714 mRNA_7347: 15715 - K09495 CCT3, TRIC5 T-complex protein 1 subunit gamma, at 59,702 to 62,348 15715 mRNA_7348: 15716 - KOG0364 Chaperonin complex component, TCP-1 gamma subunit (CCT3), at 62,723 to 63,875 15716 mRNA_7349: 15717 - K07207 TSC2 tuberous sclerosis 2, at 64,019 to 67,525 15717
Group Condition mRNA_7345 mRNA_7346 mRNA_7347 mRNA_7348 mRNA_7349
15713 15714 15715 15716 15717
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.2 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.0 N.D. -1.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.2 N.D. -1.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 N.D. -0.9 N.D.
auxotrophy YNB Glucose -0.0 +0.1 N.D. -1.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.2 N.D. -0.8 N.D.
auxotrophy Dropout Complete +0.1 -0.4 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.3 N.D. -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 N.D. +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 N.D. -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 N.D. -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.5 N.D. -0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.4 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.4 N.D. -0.4 N.D.
growth on ricinoleic acid YNB Glucose +0.0 +0.8 N.D. -0.3 N.D.
growth on oleic acid YNB Glucose +0.2 +0.4 N.D. -0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.2 +0.7 N.D. -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.7 N.D. +0.0 N.D.
growth on ypd YPD +0.1 +0.4 N.D. +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +1.1 N.D. -0.3 N.D.
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