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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15718 and 15719 are separated by 1142 nucleotides
15719 and 15720 are separated by 1008 nucleotides
15720 and 15721 are separated by 373 nucleotides
15721 and 15722 are separated by 234 nucleotides
mRNA_7350: 15718 - Hypothetical Protein, at 68,030 to 70,360
15718
mRNA_7351: 15719 - BLAST unknown [Tremella fuciformis], at 71,503 to 72,321
15719
mRNA_7352: 15720 - Hypothetical Protein, at 73,330 to 74,723
15720
mRNA_7353: 15721 - K00927 PGK, pgk phosphoglycerate kinase, at 75,097 to 76,913
15721
mRNA_7354: 15722 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 77,148 to 79,118
15722
Group
Condition
mRNA
_7350
mRNA
_7351
mRNA
_7352
mRNA
_7353
mRNA
_7354
15718
15719
15720
15721
15722
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.3
-1.3
N.D.
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.5
-1.3
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.0
-0.6
N.D.
-0.1
auxotrophy
YNB Glucose
N.D.
-0.1
-0.4
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.2
-0.7
N.D.
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-0.0
-0.2
N.D.
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
-0.5
N.D.
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
-0.2
N.D.
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.2
-0.0
N.D.
-0.1
growth on oleic acid
YNB Glucose
N.D.
-0.0
-0.0
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.3
-0.4
N.D.
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.2
-0.6
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
+0.0
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
-0.2
N.D.
+0.1
auxotrophy
Dropout Complete
N.D.
-0.0
+0.2
N.D.
-0.0
growth on ricinoleic acid
YNB Glucose
N.D.
+0.0
+0.1
N.D.
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
-0.0
N.D.
-0.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.2
+0.3
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.5
-0.1
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
+0.4
N.D.
-0.2
growth on ypd
YPD
N.D.
-0.1
+0.7
N.D.
-0.2
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