Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15727 and 15728 are separated by 1512 nucleotides15728 and 15729 are separated by 430 nucleotides15729 and 15730 are separated by 345 nucleotides15730 and 15731 are separated by 94 nucleotides mRNA_7359: 15727 - KOG3130 Uncharacterized conserved protein, at 88,085 to 88,999 15727 mRNA_7360: 15728 - Hypothetical Protein, at 90,512 to 91,159 15728 mRNA_7361: 15729 - K14685 SLC40A1, FPN1 solute carrier family 40 (iron-regulated transporter), member 1, at 91,590 to 93,600 15729 mRNA_7362: 15730 - K13035 NIT4 beta-cyano-L-alanine hydratase/nitrilase, at 93,946 to 95,192 15730 mRNA_7363: 15731 - SUPERFAMILY--SSF48371, at 95,287 to 98,403 15731
Group Condition mRNA_7359 mRNA_7360 mRNA_7361 mRNA_7362 mRNA_7363
15727 15728 15729 15730 15731
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. -0.9 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.2 -0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.5 N.D. -0.2 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -1.0 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. -0.5 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. -0.0 -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.3 -0.1 N.D.
growth on ypd YPD -0.4 N.D. +0.1 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.2 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. +0.2 -0.0 N.D.
auxotrophy Dropout Complete +0.2 N.D. -0.2 -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.3 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.5 N.D. -0.3 -0.0 N.D.
growth on oleic acid YNB Glucose +0.6 N.D. -0.4 -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. -0.1 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. -0.3 +0.4 N.D.
growth on oleic acid YNB Oleic Acid +0.2 N.D. -0.2 +0.5 N.D.
growth on ricinoleic acid YNB Glucose +0.2 N.D. -0.3 +0.7 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. -0.3 +0.6 N.D.
auxotrophy YNB Glucose +0.4 N.D. +0.2 +0.1 N.D.
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