Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15728 and 15729 are separated by 430 nucleotides15729 and 15730 are separated by 345 nucleotides15730 and 15731 are separated by 94 nucleotides15731 and 15732 are separated by 397 nucleotides mRNA_7360: 15728 - Hypothetical Protein, at 90,512 to 91,159 15728 mRNA_7361: 15729 - K14685 SLC40A1, FPN1 solute carrier family 40 (iron-regulated transporter), member 1, at 91,590 to 93,600 15729 mRNA_7362: 15730 - K13035 NIT4 beta-cyano-L-alanine hydratase/nitrilase, at 93,946 to 95,192 15730 mRNA_7363: 15731 - SUPERFAMILY--SSF48371, at 95,287 to 98,403 15731 mRNA_7364: 15732 - KOG1337 N-methyltransferase, at 98,801 to 102,847 15732
Group Condition mRNA_7360 mRNA_7361 mRNA_7362 mRNA_7363 mRNA_7364
15728 15729 15730 15731 15732
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.0 +0.4 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.9 -0.3 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 -0.5 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -0.1 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.3 -0.1 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 -0.4 N.D. -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.5 -0.1 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 +0.2 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 -0.0 N.D. +0.1
growth on oleic acid YNB Glucose N.D. -0.4 -0.0 N.D. +0.3
auxotrophy Dropout Complete N.D. -0.2 -0.0 N.D. +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 +0.2 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 +0.1 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 -0.0 N.D. +0.1
growth on ypd YPD N.D. +0.1 +0.1 N.D. +0.1
auxotrophy YNB Glucose N.D. +0.2 +0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 -0.2 N.D. +0.3
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.5 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 +0.4 N.D. +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 +0.6 N.D. +0.4
growth on ricinoleic acid YNB Glucose N.D. -0.3 +0.7 N.D. +0.5
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