Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15729 and 15730 are separated by 345 nucleotides15730 and 15731 are separated by 94 nucleotides15731 and 15732 are separated by 397 nucleotides15732 and 15733 are separated by 95 nucleotides mRNA_7361: 15729 - K14685 SLC40A1, FPN1 solute carrier family 40 (iron-regulated transporter), member 1, at 91,590 to 93,600 15729 mRNA_7362: 15730 - K13035 NIT4 beta-cyano-L-alanine hydratase/nitrilase, at 93,946 to 95,192 15730 mRNA_7363: 15731 - SUPERFAMILY--SSF48371, at 95,287 to 98,403 15731 mRNA_7364: 15732 - KOG1337 N-methyltransferase, at 98,801 to 102,847 15732 mRNA_7365: 15733 - Hypothetical Protein, at 102,943 to 104,194 15733
Group Condition mRNA_7361 mRNA_7362 mRNA_7363 mRNA_7364 mRNA_7365
15729 15730 15731 15732 15733
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 +0.4 N.D. -0.4 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.5 N.D. +0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 N.D. -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.1 N.D. +0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.4 N.D. -0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.2 N.D. -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.0 N.D. +0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 N.D. -0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 -0.3 N.D. +0.4 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.1 N.D. +0.2 -0.2
auxotrophy Dropout Complete -0.2 -0.0 N.D. +0.3 -0.0
growth on oleic acid YNB Glucose -0.4 -0.0 N.D. +0.3 +0.2
auxotrophy YNB Glucose +0.2 +0.1 N.D. +0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.2 N.D. +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.2 N.D. +0.3 +0.0
growth on oleic acid YNB Oleic Acid -0.2 +0.5 N.D. +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.0 N.D. +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.4 N.D. +0.5 -0.0
growth on ypd YPD +0.1 +0.1 N.D. +0.1 +0.3
growth on ricinoleic acid YNB Glucose -0.3 +0.7 N.D. +0.5 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.6 N.D. +0.4 +0.1
remove
mRNA_7361
plot
remove
mRNA_7362
plot
remove
mRNA_7363
remove
mRNA_7364
plot
remove
mRNA_7365
plot