Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15733 and 15734 are separated by 251 nucleotides15734 and 15735 are separated by 811 nucleotides15735 and 15736 are separated by 339 nucleotides15736 and 15737 are separated by 538 nucleotides mRNA_7365: 15733 - Hypothetical Protein, at 102,943 to 104,194 15733 mRNA_7366: 15734 - SUPERFAMILY--SSF57701, at 104,446 to 105,512 15734 mRNA_7367: 15735 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 106,324 to 107,108 15735 mRNA_7368: 15736 - K14708 SLC26A11 solute carrier family 26 (sodium-independent sulfate anion transporter), member 11, at 107,448 to 110,616 15736 mRNA_7369: 15737 - KOG1203 Predicted dehydrogenase, at 111,155 to 112,314 15737
Group Condition mRNA_7365 mRNA_7366 mRNA_7367 mRNA_7368 mRNA_7369
15733 15734 15735 15736 15737
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.4 +0.3 +0.3 -1.0
growth on ypd YPD +0.3 -0.4 -0.1 -0.3 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3 +0.1 -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.1 -0.1 +0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.4 +0.0 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 +0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.1 -0.2 -0.5 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.3 -0.2 -0.3 +0.1
growth on ricinoleic acid YNB Glucose -0.3 +0.2 -0.0 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.0 +0.1 -0.5 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.3 -0.1 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.4 -0.1 -0.2 +0.5
auxotrophy Dropout Complete -0.0 +0.4 -0.2 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 -0.0 -0.3 +1.2
growth on oleic acid YNB Oleic Acid -0.0 -0.0 +0.0 +0.1 +0.5
growth on oleic acid YNB Glucose +0.2 +0.2 +0.1 +0.0 +0.2
auxotrophy YNB Glucose -0.3 +0.5 +0.2 -0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 -0.2 +0.7 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.2 +0.2 -0.1 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.0 +0.7 +0.2 +0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.4 +0.2 +0.0 +1.7
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