Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15737 and 15738 are separated by 546 nucleotides15738 and 15739 are separated by 260 nucleotides15739 and 15740 are separated by 533 nucleotides15740 and 15741 are separated by 532 nucleotides mRNA_7369: 15737 - KOG1203 Predicted dehydrogenase, at 111,155 to 112,314 15737 mRNA_7370: 15738 - HMMPfam-Oligomerisation domain-PF02410, at 112,861 to 113,422 15738 mRNA_7371: 15739 - Hypothetical Protein, at 113,683 to 115,680 15739 mRNA_7372: 15740 - K03869 CUL3 cullin 3, at 116,214 to 119,420 15740 mRNA_7373: 15741 - HMMPfam-FAD binding domain-PF01494,PRINTS-Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature-PR00420,SUPERFAMILY--SSF51905, at 119,953 to 122,182 15741
Group Condition mRNA_7369 mRNA_7370 mRNA_7371 mRNA_7372 mRNA_7373
15737 15738 15739 15740 15741
growth on ypd YPD -0.6 -0.0 +0.1 -0.3 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.2 +0.1 -0.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.1 -0.0 -0.5 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.4 +0.1 +0.4 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 +0.0 -0.4 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.1 -0.1 -0.3 +0.3
auxotrophy Dropout Complete +0.3 +0.0 -0.4 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.0 +0.0 +0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.3 +0.1 +0.1 +0.3
auxotrophy YNB Glucose +0.3 +0.1 +0.0 -0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.2 -0.0 +0.2 -0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.2 +0.1 +0.1 +0.5
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.2 +0.1 +0.2 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.0 -0.0 +0.2 +0.4
growth on oleic acid YNB Glucose +0.2 +0.3 -0.0 +0.1 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.7 +0.3 +0.1 -0.6 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.9 +0.3 +0.1 -0.3 +0.1
growth on oleic acid YNB Oleic Acid +0.5 +0.3 -0.2 -0.1 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.1 +0.3 -0.2 +1.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.7 -0.1 +0.4 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.2 +0.1 +0.4 +0.1 +0.7
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