Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15741 and 15742 are separated by 926 nucleotides15742 and 15743 are separated by 2421 nucleotides15743 and 15744 are separated by 295 nucleotides15744 and 15745 are separated by 216 nucleotides mRNA_7373: 15741 - HMMPfam-FAD binding domain-PF01494,PRINTS-Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature-PR00420,SUPERFAMILY--SSF51905, at 119,953 to 122,182 15741 mRNA_7374: 15742 - Hypothetical Protein, at 123,109 to 123,612 15742 mRNA_7375: 15743 - HMMPfam-Chromosome segregation protein Csm1/Pcs1-PF12539, at 126,034 to 127,845 15743 mRNA_7376: 15744 - K19030 PFKFB4 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 4, at 128,141 to 130,355 15744 mRNA_7377: 15745 - KOG1256 Long-chain acyl-CoA synthetases (AMP-forming), at 130,572 to 131,007 15745
Group Condition mRNA_7373 mRNA_7374 mRNA_7375 mRNA_7376 mRNA_7377
15741 15742 15743 15744 15745
ypd buoyancy 40 hrs Low Buoyancy +0.3 -4.1 -0.1 -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.4 -1.8 -1.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.6 -1.1 -1.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -1.5 +0.1 -0.7 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.6 -0.2 -1.1 +0.1
growth on ricinoleic acid YNB Glucose +0.3 -0.7 +0.1 -0.2 -0.1
growth on ypd YPD -0.4 +0.0 -0.3 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.3 -0.3 +0.5 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 -1.0 +0.6 -0.5 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.5 -0.5 +0.1 +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -0.0 -0.1 -0.3 -0.1
growth on oleic acid YNB Glucose +0.4 +0.3 -0.5 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.2 -0.2 +0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.2 +0.6 +0.3 -0.1
auxotrophy YNB Glucose +0.2 +1.1 -0.2 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 -0.3 +0.5 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.6 +0.4 +0.1 -0.3
auxotrophy Dropout Complete +0.2 +1.1 -0.2 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 +1.0 -0.2 +0.0 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.0 +1.6 -0.2 -0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.7 +0.8 -0.6 +0.5 -0.1
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