Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15746 and 15747 are separated by 1051 nucleotides
15747 and 15748 are separated by 228 nucleotides
15748 and 15749 are separated by 1050 nucleotides
15749 and 15750 are separated by 47 nucleotides
mRNA_7378: 15746 - KOG1180 Acyl-CoA synthetase, at 132,149 to 133,750
15746
mRNA_7379: 15747 - SUPERFAMILY--SSF49344, at 134,802 to 136,760
15747
mRNA_7380: 15748 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 136,989 to 140,179
15748
mRNA_7381: 15749 - K03128 TAF2 transcription initiation factor TFIID subunit 2, at 141,230 to 147,514
15749
mRNA_7382: 15750 - Hypothetical Protein, at 147,562 to 148,955
15750
Group
Condition
mRNA
_7378
mRNA
_7379
mRNA
_7380
mRNA
_7381
mRNA
_7382
15746
15747
15748
15749
15750
growth on oleic acid
YNB Glucose
-0.5
-0.0
-1.6
N.D.
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.3
-1.2
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.1
-0.3
-0.1
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
-1.2
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
+0.2
-1.2
N.D.
+0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.5
-0.2
+0.2
N.D.
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.2
-0.8
N.D.
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.8
-0.1
+0.4
N.D.
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
+0.1
-1.5
N.D.
+0.2
auxotrophy
YNB Glucose
+0.2
-0.0
-1.0
N.D.
+0.1
auxotrophy
Dropout Complete
+0.5
-0.3
-0.8
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.8
+0.2
+0.3
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.0
-0.1
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.0
+0.0
N.D.
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.9
+0.0
-1.3
N.D.
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.8
+0.4
-1.1
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+1.0
-0.0
-1.2
N.D.
+0.3
growth on oleic acid
YNB Oleic Acid
+0.2
-0.0
-0.3
N.D.
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.1
+1.0
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.0
+0.1
N.D.
+0.2
growth on ypd
YPD
+1.1
+0.1
+0.0
N.D.
+0.3
remove
mRNA_7378
plot
remove
mRNA_7379
plot
remove
mRNA_7380
remove
mRNA_7381
plot
remove
mRNA_7382
plot