Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15749 and 15750 are separated by 47 nucleotides15750 and 15751 are separated by 694 nucleotides15751 and 15752 are separated by 606 nucleotides15752 and 15753 are separated by 289 nucleotides mRNA_7381: 15749 - K03128 TAF2 transcription initiation factor TFIID subunit 2, at 141,230 to 147,514 15749 mRNA_7382: 15750 - Hypothetical Protein, at 147,562 to 148,955 15750 mRNA_7383: 15751 - K19355 MAN mannan endo-1,4-beta-mannosidase, at 149,650 to 152,306 15751 mRNA_7384: 15752 - K11128 GAR1, NOLA1 H/ACA ribonucleoprotein complex subunit 1, at 152,913 to 154,132 15752 mRNA_7385: 15753 - ProSiteProfiles-Ubiquitin-interacting motif (UIM) repeat profile.-PS50330, at 154,422 to 157,963 15753
Group Condition mRNA_7381 mRNA_7382 mRNA_7383 mRNA_7384 mRNA_7385
15749 15750 15751 15752 15753
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 -2.0 N.D. +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 -1.1 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.3 -0.6 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 -0.2 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.0 +0.0 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 +0.1 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 +0.6 N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.1 N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 +0.3 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.4 -0.5 N.D. +0.2
auxotrophy YNB Glucose N.D. +0.1 +0.0 N.D. -0.1
growth on ypd YPD N.D. +0.3 -0.1 N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 +0.5 N.D. -0.6
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 +0.0 N.D. -0.0
growth on oleic acid YNB Glucose N.D. +0.2 +0.1 N.D. -0.0
growth on oleic acid YNB Oleic Acid N.D. +0.2 +0.3 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 +0.2 N.D. -0.1
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.4 N.D. -0.2
auxotrophy Dropout Complete N.D. +0.1 +0.4 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 +1.0 N.D. -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 +1.1 N.D. -0.2
remove
mRNA_7381
plot
remove
mRNA_7382
plot
remove
mRNA_7383
remove
mRNA_7384
plot
remove
mRNA_7385
plot