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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15751 and 15752 are separated by 606 nucleotides
15752 and 15753 are separated by 289 nucleotides
15753 and 15754 are separated by 159 nucleotides
15754 and 15755 are separated by 293 nucleotides
mRNA_7383: 15751 - K19355 MAN mannan endo-1,4-beta-mannosidase, at 149,650 to 152,306
15751
mRNA_7384: 15752 - K11128 GAR1, NOLA1 H/ACA ribonucleoprotein complex subunit 1, at 152,913 to 154,132
15752
mRNA_7385: 15753 - ProSiteProfiles-Ubiquitin-interacting motif (UIM) repeat profile.-PS50330, at 154,422 to 157,963
15753
mRNA_7386: 15754 - HMMPfam-F-box-like-PF12937, at 158,123 to 159,294
15754
mRNA_7387: 15755 - Hypothetical Protein, at 159,588 to 160,374
15755
Group
Condition
mRNA
_7383
mRNA
_7384
mRNA
_7385
mRNA
_7386
mRNA
_7387
15751
15752
15753
15754
15755
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
N.D.
+0.2
-0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.6
N.D.
-0.1
-0.2
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
N.D.
-0.4
+0.2
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
N.D.
-0.0
-0.5
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
N.D.
-0.2
-0.7
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
N.D.
-0.2
-0.8
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.0
N.D.
+0.3
+1.2
+0.1
auxotrophy
YNB Glucose
+0.0
N.D.
-0.1
-0.0
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-1.1
N.D.
+0.1
+0.7
+0.1
growth on oleic acid
YNB Oleic Acid
+0.3
N.D.
-0.2
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
N.D.
-0.6
-0.3
+0.4
growth on ricinoleic acid
YNB Glucose
+0.4
N.D.
-0.2
-0.3
+0.1
auxotrophy
Dropout Complete
+0.4
N.D.
-0.1
+0.4
-0.6
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
-0.1
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
-0.1
+0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
-0.0
+0.5
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.6
N.D.
-0.3
+0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.1
N.D.
-0.2
-0.3
-0.1
growth on oleic acid
YNB Glucose
+0.1
N.D.
-0.0
-0.4
+0.9
growth on ypd
YPD
-0.1
N.D.
+0.0
+0.4
+0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.0
N.D.
-0.3
+0.3
+0.1
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