Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15756 and 15757 are separated by 4225 nucleotides15757 and 15758 are separated by 404 nucleotides15758 and 15759 are separated by 119 nucleotides15759 and 15760 are separated by 374 nucleotides mRNA_7388: 15756 - K01951 guaA, GMPS GMP synthase (glutamine-hydrolysing), at 161,059 to 163,298 15756 mRNA_7389: 15757 - Hypothetical Protein, at 167,524 to 168,424 15757 mRNA_7390: 15758 - HMMPfam-Ubiquinol-cytochrome C reductase hinge protein-PF02320,SUPERFAMILY--SSF81531, at 168,829 to 169,694 15758 mRNA_7391: 15759 - K00547 mmuM, BHMT2 homocysteine S-methyltransferase, at 169,814 to 171,234 15759 mRNA_7392: 15760 - Hypothetical Protein, at 171,609 to 172,297 15760
Group Condition mRNA_7388 mRNA_7389 mRNA_7390 mRNA_7391 mRNA_7392
15756 15757 15758 15759 15760
growth on oleic acid YNB Oleic Acid N.D. -0.6 -0.6 -0.1 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 -1.2 -0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.2 -0.4 -0.6 +1.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 -0.3 -0.4 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.5 -0.6 -0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.4 -2.1 +0.2 +0.6
growth on ypd YPD N.D. +0.0 +0.5 -1.4 -0.1
growth on oleic acid YNB Glucose N.D. -0.1 +0.1 -0.2 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 +0.4 -1.0 +0.1
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.2 -0.2 +0.6
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 -0.3 +0.1 +0.3
auxotrophy YNB Glucose N.D. -0.9 +0.3 -0.0 +0.6
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 -0.1 +0.0 +0.6
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.5 +0.4 +0.4 +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.4 +0.3 +0.1 +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -1.6 -0.0 +0.5 +2.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 +0.4 +0.4 +0.7
auxotrophy Dropout Complete N.D. -0.1 +0.7 +0.2 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 -0.1 +0.2 +2.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.8 -0.2 +0.3 +3.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 -0.0 +0.6 +2.6
remove
mRNA_7388
plot
remove
mRNA_7389
plot
remove
mRNA_7390
remove
mRNA_7391
plot
remove
mRNA_7392
plot