Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15757 and 15758 are separated by 404 nucleotides15758 and 15759 are separated by 119 nucleotides15759 and 15760 are separated by 374 nucleotides15760 and 15761 are separated by 173 nucleotides mRNA_7389: 15757 - Hypothetical Protein, at 167,524 to 168,424 15757 mRNA_7390: 15758 - HMMPfam-Ubiquinol-cytochrome C reductase hinge protein-PF02320,SUPERFAMILY--SSF81531, at 168,829 to 169,694 15758 mRNA_7391: 15759 - K00547 mmuM, BHMT2 homocysteine S-methyltransferase, at 169,814 to 171,234 15759 mRNA_7392: 15760 - Hypothetical Protein, at 171,609 to 172,297 15760 mRNA_7393: 15761 - HMMPfam-Velvet factor-PF11754, at 172,471 to 174,336 15761
Group Condition mRNA_7389 mRNA_7390 mRNA_7391 mRNA_7392 mRNA_7393
15757 15758 15759 15760 15761
growth on oleic acid YNB Oleic Acid -0.6 -0.6 -0.1 -0.6 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 -0.4 -0.6 +1.0 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -1.2 -0.2 +0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -2.1 +0.2 +0.6 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.6 -0.2 +0.3 +0.1
growth on oleic acid YNB Glucose -0.1 +0.1 -0.2 -0.6 +0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.2 -0.2 +0.6 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.3 -0.4 -0.1 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.4 -1.0 +0.1 -0.0
growth on ypd YPD +0.0 +0.5 -1.4 -0.1 +0.7
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3 +0.1 +0.3 -0.1
auxotrophy YNB Glucose -0.9 +0.3 -0.0 +0.6 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 +0.0 +0.6 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.4 +0.4 +0.4 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.3 +0.1 +0.8 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.4 +0.4 +0.7 +0.0
auxotrophy Dropout Complete -0.1 +0.7 +0.2 +0.7 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.6 -0.0 +0.5 +2.2 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.1 +0.2 +2.4 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 -0.2 +0.3 +3.0 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.0 +0.6 +2.6 +0.6
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