Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15760 and 15761 are separated by 173 nucleotides
15761 and 15762 are separated by 952 nucleotides
15762 and 15763 are separated by 238 nucleotides
15763 and 15764 are separated by 434 nucleotides
mRNA_7392: 15760 - Hypothetical Protein, at 171,609 to 172,297
15760
mRNA_7393: 15761 - HMMPfam-Velvet factor-PF11754, at 172,471 to 174,336
15761
mRNA_7394: 15762 - KOG0569 Permease of the major facilitator superfamily, at 175,289 to 177,598
15762
mRNA_7395: 15763 - HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786, at 177,837 to 178,751
15763
mRNA_7396: 15764 - K18584 ACTR3, ARP3 actin-related protein 3, at 179,186 to 180,946
15764
Group
Condition
mRNA
_7392
mRNA
_7393
mRNA
_7394
mRNA
_7395
mRNA
_7396
15760
15761
15762
15763
15764
ypd buoyancy
40 hrs No Buoyancy Separation
+1.0
-0.5
-1.6
-0.1
-2.2
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.1
+0.1
-0.6
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.0
-0.5
-1.0
+0.9
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+2.4
+0.6
-0.3
-0.4
-2.7
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
-0.5
+0.0
+0.4
-0.5
growth on oleic acid
YNB Glucose
-0.6
+0.1
+0.1
+0.2
+0.4
growth on oleic acid
YNB Oleic Acid
-0.6
+0.0
+0.1
+0.4
+0.3
auxotrophy
Dropout Complete
+0.7
-0.0
-0.1
-0.4
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.6
-0.1
+0.4
-0.0
-0.4
auxotrophy
YNB Glucose
+0.6
-0.0
-0.2
-0.1
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
+0.1
-0.0
-0.3
+0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.8
+0.2
-0.1
-0.3
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.1
+0.4
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.7
+0.0
-0.2
-0.2
+0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+2.2
+0.5
-0.7
-1.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.2
-0.2
+0.3
+1.1
growth on ypd
YPD
-0.1
+0.7
-0.5
-0.3
+1.4
growth on ricinoleic acid
YNB Glucose
+0.6
-0.6
+0.0
+0.7
+0.9
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.7
-0.1
+0.5
+0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
+2.6
+0.6
+0.1
+0.0
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+3.0
+0.7
-0.1
-0.3
+0.1
remove
mRNA_7392
plot
remove
mRNA_7393
plot
remove
mRNA_7394
remove
mRNA_7395
plot
remove
mRNA_7396
plot