Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15760 and 15761 are separated by 173 nucleotides15761 and 15762 are separated by 952 nucleotides15762 and 15763 are separated by 238 nucleotides15763 and 15764 are separated by 434 nucleotides mRNA_7392: 15760 - Hypothetical Protein, at 171,609 to 172,297 15760 mRNA_7393: 15761 - HMMPfam-Velvet factor-PF11754, at 172,471 to 174,336 15761 mRNA_7394: 15762 - KOG0569 Permease of the major facilitator superfamily, at 175,289 to 177,598 15762 mRNA_7395: 15763 - HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786, at 177,837 to 178,751 15763 mRNA_7396: 15764 - K18584 ACTR3, ARP3 actin-related protein 3, at 179,186 to 180,946 15764
Group Condition mRNA_7392 mRNA_7393 mRNA_7394 mRNA_7395 mRNA_7396
15760 15761 15762 15763 15764
ypd buoyancy 40 hrs No Buoyancy Separation +1.0 -0.5 -1.6 -0.1 -2.2
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.1 +0.1 -0.6 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.0 -0.5 -1.0 +0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +2.4 +0.6 -0.3 -0.4 -2.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.5 +0.0 +0.4 -0.5
growth on oleic acid YNB Glucose -0.6 +0.1 +0.1 +0.2 +0.4
growth on oleic acid YNB Oleic Acid -0.6 +0.0 +0.1 +0.4 +0.3
auxotrophy Dropout Complete +0.7 -0.0 -0.1 -0.4 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.6 -0.1 +0.4 -0.0 -0.4
auxotrophy YNB Glucose +0.6 -0.0 -0.2 -0.1 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.1 -0.0 -0.3 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.8 +0.2 -0.1 -0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.1 +0.4 +0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.7 +0.0 -0.2 -0.2 +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +2.2 +0.5 -0.7 -1.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.2 -0.2 +0.3 +1.1
growth on ypd YPD -0.1 +0.7 -0.5 -0.3 +1.4
growth on ricinoleic acid YNB Glucose +0.6 -0.6 +0.0 +0.7 +0.9
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.7 -0.1 +0.5 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy +2.6 +0.6 +0.1 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +3.0 +0.7 -0.1 -0.3 +0.1
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