Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15762 and 15763 are separated by 238 nucleotides15763 and 15764 are separated by 434 nucleotides15764 and 15765 are separated by 191 nucleotides15765 and 15766 are separated by 483 nucleotides mRNA_7394: 15762 - KOG0569 Permease of the major facilitator superfamily, at 175,289 to 177,598 15762 mRNA_7395: 15763 - HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786, at 177,837 to 178,751 15763 mRNA_7396: 15764 - K18584 ACTR3, ARP3 actin-related protein 3, at 179,186 to 180,946 15764 mRNA_7397: 15765 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 181,138 to 183,665 15765 mRNA_7398: 15766 - KOG0266 WD40 repeat-containing protein, at 184,149 to 185,888 15766
Group Condition mRNA_7394 mRNA_7395 mRNA_7396 mRNA_7397 mRNA_7398
15762 15763 15764 15765 15766
ypd buoyancy 40 hrs No Buoyancy Separation -1.6 -0.1 -2.2 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.4 -2.7 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 -1.0 +0.1 -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.6 -0.6 +0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -1.0 +0.9 +0.0 -0.2
auxotrophy Dropout Complete -0.1 -0.4 +0.3 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 +0.1 -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.3 +0.5 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.3 +0.1 -0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.4 -0.5 -0.2 +0.0
auxotrophy YNB Glucose -0.2 -0.1 +0.4 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.0 +0.0 -0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 +0.7 -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.0 -0.4 +0.2 +0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.4 +0.3 -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.5 +0.7 -0.4 -0.2
growth on oleic acid YNB Glucose +0.1 +0.2 +0.4 -0.2 -0.0
growth on ypd YPD -0.5 -0.3 +1.4 +0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.2 -0.1 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.3 +1.1 -0.3 +0.0
growth on ricinoleic acid YNB Glucose +0.0 +0.7 +0.9 -0.1 +0.1
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