Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15764 and 15765 are separated by 191 nucleotides15765 and 15766 are separated by 483 nucleotides15766 and 15767 are separated by 283 nucleotides15767 and 15768 are separated by 163 nucleotides mRNA_7396: 15764 - K18584 ACTR3, ARP3 actin-related protein 3, at 179,186 to 180,946 15764 mRNA_7397: 15765 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 181,138 to 183,665 15765 mRNA_7398: 15766 - KOG0266 WD40 repeat-containing protein, at 184,149 to 185,888 15766 mRNA_7399: 15767 - K12859 TXNL4A, DIB1 U5 snRNP protein, DIM1 family, at 186,172 to 187,240 15767 mRNA_7400: 15768 - K08075 E3.1.3.32 polynucleotide 3'-phosphatase, at 187,404 to 189,530 15768
Group Condition mRNA_7396 mRNA_7397 mRNA_7398 mRNA_7399 mRNA_7400
15764 15765 15766 15767 15768
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -2.7 +0.1 -0.1 N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -2.2 -0.0 -0.2 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.6 +0.0 -0.1 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.2 +0.0 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 +0.0 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.7 -0.4 -0.2 N.D. -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.5 -0.2 -0.3 N.D. -0.2
auxotrophy Dropout Complete +0.3 -0.2 -0.1 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 +0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.2 +0.1 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.2 +0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 +0.2 N.D. -0.0
growth on oleic acid YNB Oleic Acid +0.3 -0.2 -0.2 N.D. +0.2
auxotrophy YNB Glucose +0.4 -0.1 -0.0 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.0 N.D. +0.4
growth on oleic acid YNB Glucose +0.4 -0.2 -0.0 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +1.1 -0.3 +0.0 N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.9 +0.0 -0.2 N.D. -0.3
growth on ricinoleic acid YNB Glucose +0.9 -0.1 +0.1 N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine +0.7 -0.0 -0.2 N.D. +0.0
growth on ypd YPD +1.4 +0.2 -0.1 N.D. -0.0
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