Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15765 and 15766 are separated by 483 nucleotides
15766 and 15767 are separated by 283 nucleotides
15767 and 15768 are separated by 163 nucleotides
15768 and 15769 are separated by 478 nucleotides
mRNA_7397: 15765 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 181,138 to 183,665
15765
mRNA_7398: 15766 - KOG0266 WD40 repeat-containing protein, at 184,149 to 185,888
15766
mRNA_7399: 15767 - K12859 TXNL4A, DIB1 U5 snRNP protein, DIM1 family, at 186,172 to 187,240
15767
mRNA_7400: 15768 - K08075 E3.1.3.32 polynucleotide 3'-phosphatase, at 187,404 to 189,530
15768
mRNA_7401: 15769 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 190,009 to 193,201
15769
Group
Condition
mRNA
_7397
mRNA
_7398
mRNA
_7399
mRNA
_7400
mRNA
_7401
15765
15766
15767
15768
15769
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.2
N.D.
-0.4
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.3
N.D.
-0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.2
N.D.
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.0
N.D.
-0.3
-0.2
auxotrophy
Dropout Complete
-0.2
-0.1
N.D.
-0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.0
N.D.
-0.4
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.1
N.D.
-0.3
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.1
N.D.
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.2
N.D.
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.2
N.D.
-0.0
-0.3
growth on ypd
YPD
+0.2
-0.1
N.D.
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.1
N.D.
-0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.0
N.D.
-0.2
+0.1
growth on oleic acid
YNB Glucose
-0.2
-0.0
N.D.
+0.2
+0.1
auxotrophy
YNB Glucose
-0.1
-0.0
N.D.
+0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.2
N.D.
+0.2
+0.1
growth on ricinoleic acid
YNB Glucose
-0.1
+0.1
N.D.
-0.3
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.1
N.D.
-0.3
+0.2
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
N.D.
+0.2
+0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.0
N.D.
+0.4
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.1
N.D.
+0.2
+0.1
remove
mRNA_7397
plot
remove
mRNA_7398
plot
remove
mRNA_7399
remove
mRNA_7400
plot
remove
mRNA_7401
plot