Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15765 and 15766 are separated by 483 nucleotides15766 and 15767 are separated by 283 nucleotides15767 and 15768 are separated by 163 nucleotides15768 and 15769 are separated by 478 nucleotides mRNA_7397: 15765 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 181,138 to 183,665 15765 mRNA_7398: 15766 - KOG0266 WD40 repeat-containing protein, at 184,149 to 185,888 15766 mRNA_7399: 15767 - K12859 TXNL4A, DIB1 U5 snRNP protein, DIM1 family, at 186,172 to 187,240 15767 mRNA_7400: 15768 - K08075 E3.1.3.32 polynucleotide 3'-phosphatase, at 187,404 to 189,530 15768 mRNA_7401: 15769 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 190,009 to 193,201 15769
Group Condition mRNA_7397 mRNA_7398 mRNA_7399 mRNA_7400 mRNA_7401
15765 15766 15767 15768 15769
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.2 N.D. -0.4 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.3 N.D. -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.2 N.D. -0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.0 N.D. -0.3 -0.2
auxotrophy Dropout Complete -0.2 -0.1 N.D. -0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.0 N.D. -0.4 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.1 N.D. -0.3 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 N.D. -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.2 N.D. +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 N.D. -0.0 -0.3
growth on ypd YPD +0.2 -0.1 N.D. -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.1 N.D. -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.0 N.D. -0.2 +0.1
growth on oleic acid YNB Glucose -0.2 -0.0 N.D. +0.2 +0.1
auxotrophy YNB Glucose -0.1 -0.0 N.D. +0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.2 N.D. +0.2 +0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.1 N.D. -0.3 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 N.D. -0.3 +0.2
growth on oleic acid YNB Oleic Acid -0.2 -0.2 N.D. +0.2 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 N.D. +0.4 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 N.D. +0.2 +0.1
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