Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15768 and 15769 are separated by 478 nucleotides15769 and 15770 are separated by 132 nucleotides15770 and 15771 are separated by 721 nucleotides15771 and 15772 are separated by 208 nucleotides mRNA_7400: 15768 - K08075 E3.1.3.32 polynucleotide 3'-phosphatase, at 187,404 to 189,530 15768 mRNA_7401: 15769 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 190,009 to 193,201 15769 mRNA_7402: 15770 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 193,334 to 195,902 15770 mRNA_7403: 15771 - Hypothetical Protein, at 196,624 to 197,387 15771 mRNA_7404: 15772 - HMMPfam-Protein of unknown function (DUF2470)-PF10615, at 197,596 to 198,665 15772
Group Condition mRNA_7400 mRNA_7401 mRNA_7402 mRNA_7403 mRNA_7404
15768 15769 15770 15771 15772
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 -0.7 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 -0.4 N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 -0.8 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.3 -0.8 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 -0.6 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.2 +0.0 N.D. -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 -0.5 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.0 -0.2 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.1 +0.1 N.D. -0.5
auxotrophy Dropout Complete -0.1 -0.0 +0.0 N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.3 +0.5 +0.0 N.D. -0.5
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.1 -0.1 N.D. -0.2
auxotrophy YNB Glucose +0.1 +0.1 -0.3 N.D. -0.0
growth on ypd YPD -0.0 -0.3 -0.1 N.D. +0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.1 -0.1 N.D. +0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.1 -0.4 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.2 -0.1 N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 -0.1 N.D. +0.0
growth on oleic acid YNB Glucose +0.2 +0.1 +0.1 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.3 -0.2 N.D. +0.0
growth on oleic acid YNB Oleic Acid +0.2 +0.4 -0.1 N.D. +0.2
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