Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15769 and 15770 are separated by 132 nucleotides15770 and 15771 are separated by 721 nucleotides15771 and 15772 are separated by 208 nucleotides15772 and 15773 are separated by 211 nucleotides mRNA_7401: 15769 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 190,009 to 193,201 15769 mRNA_7402: 15770 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 193,334 to 195,902 15770 mRNA_7403: 15771 - Hypothetical Protein, at 196,624 to 197,387 15771 mRNA_7404: 15772 - HMMPfam-Protein of unknown function (DUF2470)-PF10615, at 197,596 to 198,665 15772 mRNA_7405: 15773 - KOG1589 Uncharacterized conserved protein, at 198,877 to 199,727 15773
Group Condition mRNA_7401 mRNA_7402 mRNA_7403 mRNA_7404 mRNA_7405
15769 15770 15771 15772 15773
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.7 N.D. -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.4 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.8 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.8 N.D. +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.6 N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.5 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.0 N.D. -0.7 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 N.D. -0.5 N.D.
auxotrophy Dropout Complete -0.0 +0.0 N.D. -0.3 N.D.
auxotrophy YNB Glucose +0.1 -0.3 N.D. -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 N.D. -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.4 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.5 +0.0 N.D. -0.5 N.D.
growth on ypd YPD -0.3 -0.1 N.D. +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 N.D. +0.0 N.D.
growth on oleic acid YNB Glucose +0.1 +0.1 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.2 N.D. +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 N.D. +0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 N.D. +0.5 N.D.
growth on oleic acid YNB Oleic Acid +0.4 -0.1 N.D. +0.2 N.D.
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