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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15771 and 15772 are separated by 208 nucleotides
15772 and 15773 are separated by 211 nucleotides
15773 and 15774 are separated by 745 nucleotides
15774 and 15775 are separated by 581 nucleotides
mRNA_7403: 15771 - Hypothetical Protein, at 196,624 to 197,387
15771
mRNA_7404: 15772 - HMMPfam-Protein of unknown function (DUF2470)-PF10615, at 197,596 to 198,665
15772
mRNA_7405: 15773 - KOG1589 Uncharacterized conserved protein, at 198,877 to 199,727
15773
mRNA_7406: 15774 - Hypothetical Protein, at 200,473 to 201,495
15774
mRNA_7407: 15775 - Hypothetical Protein, at 202,077 to 204,575
15775
Group
Condition
mRNA
_7403
mRNA
_7404
mRNA
_7405
mRNA
_7406
mRNA
_7407
15771
15772
15773
15774
15775
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.7
N.D.
-0.4
-0.1
growth on oleic acid
YNB Glucose
N.D.
-0.1
N.D.
-0.4
-0.4
growth on ricinoleic acid
YNB Glucose
N.D.
-0.5
N.D.
-0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.5
N.D.
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.2
N.D.
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.5
N.D.
-0.7
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
N.D.
-0.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
N.D.
-0.5
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.0
N.D.
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
N.D.
-0.3
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
N.D.
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.0
N.D.
-0.4
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.3
N.D.
+0.0
+0.4
auxotrophy
Dropout Complete
N.D.
-0.3
N.D.
+0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
N.D.
+0.3
+0.2
growth on ypd
YPD
N.D.
+0.4
N.D.
-0.0
+0.1
auxotrophy
YNB Glucose
N.D.
-0.0
N.D.
+0.1
+0.5
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.3
N.D.
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
N.D.
+0.5
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
N.D.
+0.6
+0.0
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