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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15777 and 15778 are separated by 162 nucleotides
15778 and 15779 are separated by 540 nucleotides
15779 and 15780 are separated by 207 nucleotides
15780 and 15781 are separated by 120 nucleotides
mRNA_7409: 15777 - HMMPfam-Nucleoporin subcomplex protein binding to Pom34-PF10487, at 208,136 to 214,432
15777
mRNA_7410: 15778 - BLAST capsular associated protein [Coprinopsis cinerea ..., at 214,595 to 216,194
15778
mRNA_7411: 15779 - K02537 MAD2 mitotic spindle assembly checkpoint protein MAD2, at 216,735 to 217,924
15779
mRNA_7412: 15780 - K03596 lepA GTP-binding protein LepA, at 218,132 to 221,123
15780
mRNA_7413: 15781 - K17550 PPP1R7, SDS22 protein phosphatase 1 regulatory subunit 7, at 221,244 to 223,051
15781
Group
Condition
mRNA
_7409
mRNA
_7410
mRNA
_7411
mRNA
_7412
mRNA
_7413
15777
15778
15779
15780
15781
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
-0.4
-2.9
+0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.2
-1.3
-0.2
N.D.
auxotrophy
Dropout Complete
-0.4
-0.4
-1.1
-0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.1
-1.5
+0.1
N.D.
growth on ypd
YPD
+0.1
-0.0
-0.6
-0.3
N.D.
auxotrophy
YNB Glucose
-0.2
-0.3
-0.5
+0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.2
-0.3
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.0
-0.7
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.3
-0.5
+0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.0
+0.0
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
+0.4
-0.1
-0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
-0.2
-0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.2
-0.2
-0.1
N.D.
growth on ricinoleic acid
YNB Glucose
-0.3
-0.2
+0.0
+0.3
N.D.
growth on oleic acid
YNB Oleic Acid
+0.4
-0.1
-0.0
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.4
-0.5
-0.1
N.D.
growth on oleic acid
YNB Glucose
+0.0
+0.2
+0.1
-0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.1
+0.3
+0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
+0.6
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.5
-0.1
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.4
+0.2
-0.0
N.D.
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