Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15787 and 15788 are separated by 291 nucleotides
15788 and 15789 are separated by 384 nucleotides
15789 and 15790 are separated by 417 nucleotides
15790 and 15791 are separated by 753 nucleotides
mRNA_7419: 15787 - Hypothetical Protein, at 236,093 to 236,724
15787
mRNA_7420: 15788 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 237,016 to 237,326
15788
mRNA_7421: 15789 - Hypothetical Protein, at 237,711 to 239,043
15789
mRNA_7422: 15790 - Hypothetical Protein, at 239,461 to 241,066
15790
mRNA_7423: 15791 - K01568 PDC, pdc pyruvate decarboxylase, at 241,820 to 244,654
15791
Group
Condition
mRNA
_7419
mRNA
_7420
mRNA
_7421
mRNA
_7422
mRNA
_7423
15787
15788
15789
15790
15791
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
N.D.
+0.2
-1.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
N.D.
+0.2
-0.7
-0.2
growth on oleic acid
YNB Glucose
+0.0
N.D.
-0.5
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
N.D.
-0.2
+0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
N.D.
-0.5
+0.2
-0.1
growth on oleic acid
YNB Oleic Acid
+0.5
N.D.
-0.4
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.3
N.D.
-0.1
+0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.5
N.D.
+0.0
-0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.7
N.D.
-0.6
+0.5
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.2
N.D.
-0.1
-0.5
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.5
N.D.
+0.1
-0.8
-0.4
growth on ypd
YPD
+1.4
N.D.
-0.1
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.2
N.D.
+0.0
-0.0
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
N.D.
+0.3
-0.3
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
N.D.
+0.4
+0.5
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.5
N.D.
+0.2
-0.4
-0.2
auxotrophy
YNB Glucose
+1.5
N.D.
-0.2
+0.4
-0.5
ypd buoyancy
40 hrs Low Buoyancy
+1.4
N.D.
-0.1
-0.0
+0.1
auxotrophy
Dropout Complete
+1.9
N.D.
-0.3
+0.6
-0.7
auxotrophy
YNB Glucose 75mM Methionine
+1.8
N.D.
-0.4
+0.8
-0.5
auxotrophy
YNB Glucose 75mM Arginine
+1.9
N.D.
-0.1
+0.5
-0.2
remove
mRNA_7419
plot
remove
mRNA_7420
plot
remove
mRNA_7421
remove
mRNA_7422
plot
remove
mRNA_7423
plot