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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15788 and 15789 are separated by 384 nucleotides
15789 and 15790 are separated by 417 nucleotides
15790 and 15791 are separated by 753 nucleotides
15791 and 15792 are separated by 384 nucleotides
mRNA_7420: 15788 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 237,016 to 237,326
15788
mRNA_7421: 15789 - Hypothetical Protein, at 237,711 to 239,043
15789
mRNA_7422: 15790 - Hypothetical Protein, at 239,461 to 241,066
15790
mRNA_7423: 15791 - K01568 PDC, pdc pyruvate decarboxylase, at 241,820 to 244,654
15791
mRNA_7424: 15792 - Hypothetical Protein, at 245,039 to 245,546
15792
Group
Condition
mRNA
_7420
mRNA
_7421
mRNA
_7422
mRNA
_7423
mRNA
_7424
15788
15789
15790
15791
15792
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.2
-1.1
-0.4
-1.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
-0.8
-0.4
-1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.1
-0.5
-0.2
-0.9
growth on oleic acid
YNB Glucose
N.D.
-0.5
-0.0
-0.1
-0.7
growth on oleic acid
YNB Oleic Acid
N.D.
-0.4
-0.1
-0.2
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
-0.7
-0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
-0.2
-0.0
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.5
+0.2
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
+0.2
-0.1
-0.3
growth on ypd
YPD
N.D.
-0.1
-0.4
-0.4
+0.6
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
-0.0
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
-0.4
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.0
-0.0
-0.4
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.3
-0.3
+0.3
-0.3
growth on ricinoleic acid
YNB Glucose
N.D.
-0.2
+0.2
-0.2
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.6
+0.5
-0.2
+0.5
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
+0.5
-0.2
+0.8
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.4
+0.5
+0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.4
+0.8
-0.5
+1.3
auxotrophy
Dropout Complete
N.D.
-0.3
+0.6
-0.7
+1.6
auxotrophy
YNB Glucose
N.D.
-0.2
+0.4
-0.5
+1.8
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