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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15800 and 15801 are separated by 412 nucleotides
15801 and 15802 are separated by 381 nucleotides
15802 and 15803 are separated by 762 nucleotides
15803 and 15804 are separated by 485 nucleotides
mRNA_7432: 15800 - KOG4197 FOG PPR repeat, at 263,025 to 264,767
15800
mRNA_7433: 15801 - K10356 MYO1 myosin I, at 265,180 to 270,208
15801
mRNA_7434: 15802 - HMMPfam-Outer membrane protein TOM13-PF08219, at 270,590 to 273,357
15802
mRNA_7435: 15803 - K09539 DNAJC19 DnaJ homolog subfamily C member 19, at 274,120 to 274,486
15803
mRNA_7436: 15804 - Hypothetical Protein, at 274,972 to 276,124
15804
Group
Condition
mRNA
_7432
mRNA
_7433
mRNA
_7434
mRNA
_7435
mRNA
_7436
15800
15801
15802
15803
15804
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-1.9
-2.2
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-1.2
-0.6
N.D.
-0.5
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.9
-0.7
N.D.
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-1.5
-0.5
N.D.
+0.1
auxotrophy
Dropout Complete
N.D.
-0.9
-0.3
N.D.
-0.8
auxotrophy
YNB Glucose
N.D.
-0.9
-0.5
N.D.
-0.4
growth on oleic acid
YNB Glucose
N.D.
-0.5
-0.1
N.D.
-0.0
growth on ypd
YPD
N.D.
-0.2
+0.6
N.D.
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.6
+0.3
N.D.
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.8
+1.1
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.2
+0.6
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.3
+0.3
N.D.
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.7
+0.3
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.7
+0.5
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+1.1
+0.1
N.D.
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.7
+0.7
N.D.
+0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.6
+1.2
N.D.
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
+0.4
+1.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+1.5
+0.5
N.D.
-0.4
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+1.0
+1.2
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+2.0
+0.1
N.D.
+0.1
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