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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15802 and 15803 are separated by 762 nucleotides
15803 and 15804 are separated by 485 nucleotides
15804 and 15805 are separated by 399 nucleotides
15805 and 15806 are separated by 253 nucleotides
mRNA_7434: 15802 - HMMPfam-Outer membrane protein TOM13-PF08219, at 270,590 to 273,357
15802
mRNA_7435: 15803 - K09539 DNAJC19 DnaJ homolog subfamily C member 19, at 274,120 to 274,486
15803
mRNA_7436: 15804 - Hypothetical Protein, at 274,972 to 276,124
15804
mRNA_7437: 15805 - K01756 purB, ADSL adenylosuccinate lyase, at 276,524 to 278,511
15805
mRNA_7438: 15806 - K01455 E3.5.1.49 formamidase, at 278,765 to 280,421
15806
Group
Condition
mRNA
_7434
mRNA
_7435
mRNA
_7436
mRNA
_7437
mRNA
_7438
15802
15803
15804
15805
15806
facs on lipid accumulation
Sorted High BODIPY Gate
-2.2
N.D.
+0.3
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.7
N.D.
-0.5
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.6
N.D.
-0.5
N.D.
-0.0
auxotrophy
Dropout Complete
-0.3
N.D.
-0.8
N.D.
-0.1
auxotrophy
YNB Glucose
-0.5
N.D.
-0.4
N.D.
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
N.D.
+0.1
N.D.
+0.3
growth on oleic acid
YNB Glucose
-0.1
N.D.
-0.0
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
N.D.
-0.4
N.D.
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
N.D.
+0.1
N.D.
+0.0
growth on ypd
YPD
+0.6
N.D.
-0.6
N.D.
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+1.1
N.D.
-0.3
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
N.D.
+0.3
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
N.D.
+0.2
N.D.
+0.2
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
+0.0
N.D.
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
N.D.
+0.1
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
N.D.
+0.0
N.D.
+0.3
ypd buoyancy
40 hrs High Buoyancy
+1.2
N.D.
-0.3
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+1.2
N.D.
-0.1
N.D.
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
N.D.
+0.1
N.D.
+1.0
growth on oleic acid
YNB Oleic Acid
+1.1
N.D.
+0.1
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.7
N.D.
+0.0
N.D.
+0.9
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