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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15804 and 15805 are separated by 399 nucleotides
15805 and 15806 are separated by 253 nucleotides
15806 and 15807 are separated by 926 nucleotides
15807 and 15808 are separated by 240 nucleotides
mRNA_7436: 15804 - Hypothetical Protein, at 274,972 to 276,124
15804
mRNA_7437: 15805 - K01756 purB, ADSL adenylosuccinate lyase, at 276,524 to 278,511
15805
mRNA_7438: 15806 - K01455 E3.5.1.49 formamidase, at 278,765 to 280,421
15806
mRNA_7439: 15807 - K20989 DUR3 urea-proton symporter, at 281,348 to 284,451
15807
mRNA_7440: 15808 - KOG0537 Cytochrome b5, at 284,692 to 285,285
15808
Group
Condition
mRNA
_7436
mRNA
_7437
mRNA
_7438
mRNA
_7439
mRNA
_7440
15804
15805
15806
15807
15808
auxotrophy
Dropout Complete
-0.8
N.D.
-0.1
-0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.3
N.D.
-0.2
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.5
N.D.
-0.0
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
N.D.
+0.0
-0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.3
N.D.
+0.1
-0.0
-0.4
auxotrophy
YNB Glucose
-0.4
N.D.
-0.1
+0.0
-0.1
growth on ypd
YPD
-0.6
N.D.
+0.4
-0.0
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.5
N.D.
+0.1
+0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
+0.0
-0.0
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
N.D.
+0.1
+0.1
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
N.D.
+0.3
-0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
N.D.
+0.2
-0.5
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
N.D.
+0.1
+0.1
-0.2
growth on oleic acid
YNB Glucose
-0.0
N.D.
-0.0
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
N.D.
+0.1
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
N.D.
+0.3
-0.0
+0.1
growth on ricinoleic acid
YNB Glucose
+0.0
N.D.
+0.6
+0.0
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
N.D.
+0.0
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
+0.3
+0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
N.D.
+1.0
+0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
N.D.
+0.9
+0.1
-0.2
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