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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15807 and 15808 are separated by 240 nucleotides
15808 and 15809 are separated by 1727 nucleotides
15809 and 15810 are separated by 425 nucleotides
15810 and 15811 are separated by 740 nucleotides
mRNA_7439: 15807 - K20989 DUR3 urea-proton symporter, at 281,348 to 284,451
15807
mRNA_7440: 15808 - KOG0537 Cytochrome b5, at 284,692 to 285,285
15808
mRNA_7441: 15809 - K08884 K08884 serine/threonine protein kinase, bacterial, at 287,013 to 288,261
15809
mRNA_7442: 15810 - K02886 RP-L2, MRPL2, rplB large subunit ribosomal protein L2, at 288,687 to 290,089
15810
mRNA_7443: 15811 - Hypothetical Protein, at 290,830 to 292,138
15811
Group
Condition
mRNA
_7439
mRNA
_7440
mRNA
_7441
mRNA
_7442
mRNA
_7443
15807
15808
15809
15810
15811
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.7
-0.8
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.4
-0.0
N.D.
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.0
-0.2
N.D.
-0.4
growth on ypd
YPD
-0.0
-0.4
-0.5
N.D.
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.4
+0.2
N.D.
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
+0.0
+0.3
N.D.
-0.5
growth on oleic acid
YNB Oleic Acid
+0.1
-0.2
-0.6
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.2
-0.1
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.2
+0.2
N.D.
-0.6
auxotrophy
Dropout Complete
-0.1
-0.4
+0.5
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
+0.1
+0.2
N.D.
-0.0
growth on oleic acid
YNB Glucose
+0.2
+0.1
-0.2
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.2
+0.7
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.2
+1.0
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.4
+0.2
N.D.
+0.3
auxotrophy
YNB Glucose
+0.0
-0.1
+0.9
N.D.
+0.2
growth on ricinoleic acid
YNB Glucose
+0.0
-0.2
+1.2
N.D.
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.4
+1.2
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
+1.4
N.D.
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.3
+1.5
N.D.
+0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.2
+1.6
N.D.
+0.3
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