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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15809 and 15810 are separated by 425 nucleotides
15810 and 15811 are separated by 740 nucleotides
15811 and 15812 are separated by 166 nucleotides
15812 and 15813 are separated by 236 nucleotides
mRNA_7441: 15809 - K08884 K08884 serine/threonine protein kinase, bacterial, at 287,013 to 288,261
15809
mRNA_7442: 15810 - K02886 RP-L2, MRPL2, rplB large subunit ribosomal protein L2, at 288,687 to 290,089
15810
mRNA_7443: 15811 - Hypothetical Protein, at 290,830 to 292,138
15811
mRNA_7444: 15812 - Hypothetical Protein, at 292,305 to 293,773
15812
mRNA_7445: 15813 - Hypothetical Protein, at 294,010 to 294,708
15813
Group
Condition
mRNA
_7441
mRNA
_7442
mRNA
_7443
mRNA
_7444
mRNA
_7445
15809
15810
15811
15812
15813
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
N.D.
-0.4
+0.1
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
N.D.
+0.1
-0.5
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
N.D.
-0.6
+0.2
-0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
N.D.
-0.6
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
-0.4
-0.7
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
N.D.
+0.3
-0.9
-0.0
growth on oleic acid
YNB Glucose
-0.2
N.D.
+0.2
+0.0
-0.3
growth on oleic acid
YNB Oleic Acid
-0.6
N.D.
+0.3
+0.4
-0.2
growth on ypd
YPD
-0.5
N.D.
+0.2
+0.4
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
N.D.
-0.0
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
+0.2
-0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
N.D.
-0.5
+0.1
+0.2
growth on ricinoleic acid
YNB Glucose
+1.2
N.D.
+0.0
-0.3
-0.7
auxotrophy
Dropout Complete
+0.5
N.D.
+0.1
+0.0
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.0
N.D.
-0.1
+0.2
-0.7
auxotrophy
YNB Glucose 75mM Methionine
+0.7
N.D.
-0.1
+0.3
-0.3
auxotrophy
YNB Glucose
+0.9
N.D.
+0.2
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+1.4
N.D.
+0.2
+0.0
-0.4
ypd buoyancy
40 hrs High Buoyancy
+1.2
N.D.
+0.3
-0.2
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+1.6
N.D.
+0.3
-0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+1.5
N.D.
+0.6
-0.3
+0.1
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