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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15814 and 15815 are separated by 365 nucleotides
15815 and 15816 are separated by 2423 nucleotides
15816 and 15817 are separated by 149 nucleotides
15817 and 15818 are separated by 421 nucleotides
mRNA_7446: 15814 - K14085 ALDH7A1 aldehyde dehydrogenase family 7 member A1, at 295,299 to 297,030
15814
mRNA_7447: 15815 - HMMPfam-Uncharacterized protein conserved in bacteria (DUF2236)-PF09995, at 297,396 to 299,306
15815
mRNA_7448: 15816 - BLAST putative protein of unknown function [Pseudozyma ..., at 301,730 to 303,793
15816
mRNA_7449: 15817 - BLAST GH19984 [Drosophila grimshawi], at 303,943 to 305,130
15817
mRNA_7450: 15818 - BLAST proteophosphoglycan protein, putative [Rhizoctonia so..., at 305,552 to 306,799
15818
Group
Condition
mRNA
_7446
mRNA
_7447
mRNA
_7448
mRNA
_7449
mRNA
_7450
15814
15815
15816
15817
15818
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.0
-2.3
-0.2
-1.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.1
-3.1
+0.2
-0.5
growth on oleic acid
YNB Glucose
+0.1
-0.0
-1.7
+0.2
-1.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.0
-0.1
-0.6
+0.6
-1.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.6
+0.4
+0.0
-1.2
ypd buoyancy
40 hrs No Buoyancy Separation
-1.2
+0.1
-0.4
+0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.4
-0.0
+0.3
+0.4
-1.4
growth on ypd
YPD
-0.6
+0.0
+0.3
-0.1
-0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.2
-0.3
+0.9
-0.8
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
-1.0
+0.8
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.1
-1.5
+0.7
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.1
-0.1
+0.5
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.2
-0.6
+0.7
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
+0.2
+0.3
+0.5
-0.3
auxotrophy
Dropout Complete
-0.2
-0.3
+1.8
+0.6
-0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.2
+0.9
+0.9
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.2
+1.0
+0.4
+0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.1
+1.5
+0.2
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.5
-0.3
+0.0
+0.9
+0.8
auxotrophy
YNB Glucose
+0.4
-0.0
+1.2
+0.8
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.0
+1.6
+0.7
+0.4
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