Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15815 and 15816 are separated by 2423 nucleotides
15816 and 15817 are separated by 149 nucleotides
15817 and 15818 are separated by 421 nucleotides
15818 and 15819 are separated by 512 nucleotides
mRNA_7447: 15815 - HMMPfam-Uncharacterized protein conserved in bacteria (DUF2236)-PF09995, at 297,396 to 299,306
15815
mRNA_7448: 15816 - BLAST putative protein of unknown function [Pseudozyma ..., at 301,730 to 303,793
15816
mRNA_7449: 15817 - BLAST GH19984 [Drosophila grimshawi], at 303,943 to 305,130
15817
mRNA_7450: 15818 - BLAST proteophosphoglycan protein, putative [Rhizoctonia so..., at 305,552 to 306,799
15818
mRNA_7451: 15819 - Hypothetical Protein, at 307,312 to 308,652
15819
Group
Condition
mRNA
_7447
mRNA
_7448
mRNA
_7449
mRNA
_7450
mRNA
_7451
15815
15816
15817
15818
15819
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-2.3
-0.2
-1.7
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-3.1
+0.2
-0.5
-0.3
growth on oleic acid
YNB Glucose
-0.0
-1.7
+0.2
-1.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
+0.4
+0.0
-1.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.6
+0.6
-1.2
+0.1
growth on ypd
YPD
+0.0
+0.3
-0.1
-0.8
-0.5
growth on oleic acid
YNB Oleic Acid
-0.0
+0.3
+0.4
-1.4
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.4
+0.1
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-1.5
+0.7
+0.5
-0.0
growth on ricinoleic acid
YNB Glucose
-0.1
-1.0
+0.8
+0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.3
+0.9
-0.8
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.6
+0.7
-0.6
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.1
+0.5
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.3
+0.5
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.0
+0.9
+0.8
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.9
+0.9
-0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+1.5
+0.2
+0.3
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
+1.0
+0.4
+0.7
-0.2
auxotrophy
Dropout Complete
-0.3
+1.8
+0.6
-0.5
+0.3
auxotrophy
YNB Glucose
-0.0
+1.2
+0.8
-0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+1.6
+0.7
+0.4
-0.3
remove
mRNA_7447
plot
remove
mRNA_7448
plot
remove
mRNA_7449
remove
mRNA_7450
plot
remove
mRNA_7451
plot